Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0722 |
Symbol | |
ID | 6408375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 757405 |
End bp | 757932 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642710637 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_001989757 |
Protein GI | 192289152 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.702858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGCGA AGAAACGCGT TGTTACCGAT AATGCAGCAG ATGCGAAGAT GGAGCTGGCC AACCGGCTGT TCTTCCGTCT CTACCAATGC GCAAATATGT TGCATAAAAC CGGTACGCGG GCGGTCGAGG CCGAGGGGCT GACGACGCAG CAATGGGCGG TGCTCGGAGC GCTGTCTCGA TCCGCGGTGG CGAACGGCAT GAGCGTCGGC GATCTGGCGC GCTATCTGAT GGTGAGCCGA CAGAATCTGA CCGGTCTGAT CGGCCGGATG GAGCGCGACG GCCATGTCGC CGTGGTGCCG GACGAGCGCG ATCGCCGCTC ACGGCTGGTG ACGATGACCA AGTCAGGGCG CCACGTCTGG GAGGTGCTCG CGCAGCCGAA GATCCGCGCC TATTACGGCG AAGTGCTCGG CGACTTCTCG ATCAACGACG TCACCCACAC GCTGCACTAC CTGCTCAAGA TCCTCGACAA CATGACCCGT CTCGACGACG GCGCTGCTGG CGAAACGGCG GCGACGGATC TGGAATGA
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Protein sequence | MMAKKRVVTD NAADAKMELA NRLFFRLYQC ANMLHKTGTR AVEAEGLTTQ QWAVLGALSR SAVANGMSVG DLARYLMVSR QNLTGLIGRM ERDGHVAVVP DERDRRSRLV TMTKSGRHVW EVLAQPKIRA YYGEVLGDFS INDVTHTLHY LLKILDNMTR LDDGAAGETA ATDLE
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