Gene Rpal_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0604 
Symbol 
ID6408254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp657965 
End bp658459 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID642710517 
Productprotein of unknown function DUF1178 
Protein accessionYP_001989639 
Protein GI192289034 
COG category[S] Function unknown 
COG ID[COG5319] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.494112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCT ACAGCCTGCG CTGCGACAAA GGCCACGTGT TCGAGAGCTG GTTTCAGAGC 
TCGTCGGCCT ATGAGTCCCA GGTTCGGCGC AAGCTGGTGA GCTGCCCGCA ATGCGATTCG 
GTGAAGGTCG AAAAGGCGAT CATGGCGCCG CAGATCGTCG GCAAGAAAGG CCGCGGCCGC 
GCGCCCGAGC CGGCTGCCGC CGAACCCGCC GCGACCAACC TTCCGGCGGA GACCGCTTCT 
GCAAATTCGC CGACGCCGCT ATTGATGGCG CAGGAGCGCG AGCTGCGCGC CAAGCTGAAG 
GAATTGCGCG ACCACATCGT CAAGACCGCC GACAATGTCG GCGAACGCTT CCCCGAGCAG 
GCGCGCGCCA TGCACTATGG CGATATCGAA CACCGCCCGA TCTACGGCGA GGCTTCGCCG 
ACCGAGGCCA AGGCGCTGAT CGAGGAAGGC ATCGAGGTCG CGCCGCTACC GGTGTTGCCG 
GACGATCGGA ATTGA
 
Protein sequence
MIRYSLRCDK GHVFESWFQS SSAYESQVRR KLVSCPQCDS VKVEKAIMAP QIVGKKGRGR 
APEPAAAEPA ATNLPAETAS ANSPTPLLMA QERELRAKLK ELRDHIVKTA DNVGERFPEQ 
ARAMHYGDIE HRPIYGEASP TEAKALIEEG IEVAPLPVLP DDRN