| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0546 |
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| Symbol | |
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| ID | 6408196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 597050 |
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| End bp | 597772 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710459 |
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| Product | LrgB family protein |
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| Protein accession | YP_001989581 |
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| Protein GI | 192288976 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.415827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCA ACCCGTTCTC GCTGTGGGTG TACCTGTCGC AGACGCCGCT GCTGTGGCTG
ACCGTGACGC TGCTGGTCTA TGCGGCGACC GATGCGGTGT CGCAGGCGAC CGGGCGCAAT
CCGCTGGTCA ATCCGGTTCT GCACGCCATG TGGATCATCG GCGTGTTCCT GTGGGCGACC
GGCACCTCCT ACACGACCTA TTTCAGCGGC GCGCAGTTCG TGCATTTTCT GCTCGGCCCC
GCCACCGTGG CGCTGGCGGT TCCGCTGTAC GAGAACCGCA AGCTGGTGCT GGCCGCGATT
CTGCCGATGG CCCTGGCGCT GGTGGTCGGC TGTGTCACCG CGATCGTTTC GGTGGTCTGG
CTGGCGCAGC TTGCCGGGCT GCCCGAAACC GTGGTGCTGT CGCTGGCACC GAAATCGGTG
ACGGCCGGTG TCGCGATGGG TATCAGCGAG TCGCTGCATG CCGACCCGTC GCTCACCGCG
GTGGCGGTGA TCCTCACCGG CATCCTCGGC GCCATCGTCG TCTCGCCGCT GATGAACCGG
CTGGGAATTC GGGACTACCG GGCGCGCGGC TTCGCCGTCG GCCTCGCCTC GCACGGCATC
GGCACCGCGC GGGCATTCCA GGTCGACGCC ATTGCCGGCG TGTTCGCCGG CATCGCAATG
AGCCTGAACG CGCTGATCAC CGCGCTCCTG GTGCCGGTCC TGGTTACTCT GCTGGTGCGC
TGA
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| Protein sequence | MNANPFSLWV YLSQTPLLWL TVTLLVYAAT DAVSQATGRN PLVNPVLHAM WIIGVFLWAT
GTSYTTYFSG AQFVHFLLGP ATVALAVPLY ENRKLVLAAI LPMALALVVG CVTAIVSVVW
LAQLAGLPET VVLSLAPKSV TAGVAMGISE SLHADPSLTA VAVILTGILG AIVVSPLMNR
LGIRDYRARG FAVGLASHGI GTARAFQVDA IAGVFAGIAM SLNALITALL VPVLVTLLVR
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