| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0485 |
|---|
| Symbol | |
|---|
| ID | 6408134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 523686 |
|---|
| End bp | 524471 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642710397 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_001989520 |
|---|
| Protein GI | 192288915 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.474885 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA TCGTCCTGCA AGATCTCGAC CGCGGCCTGC TCACCATCAC GATGAACCGT
CCGGATCGGC GCAACGCGCT CAATCAGGAC ATGATCCGCG GCTTGGTGGA GGCGGCGCAT
CGCGCCAAGG ACGATCCGGA AGTCCGCGCG GTGTTGTTGA AGGGCGGCGG TACATTCTGC
GTCGGCGGCG ACGTCAAGTC GATGGCGGCT GCGGGTGCTC CGCCGCCGCT GGAACAGAAG
GTGGCGAACC TCCGCCGCGG CATGGAAGTG TCACGTCTGC TGCATCAGAT GCCCAAGCCG
GTGGTGGCGC AGATCGACGG CGCAGCCGCT GGCGCCGGGC TGTCGATGGC GCTCGCCTGC
GATCTGCGGG TCGCAGGTGC TTCGGCCAAG ATCACCACTG CGTTCGCCAA GGTCGGCCTC
TCCGGCGATT TCGGCGGCAC GTACTTCCTG ACTCAGCTGA TCGGCGCCGC GAAGGCGCGG
GAACTATATC TCACCTCGCC GGTGCTGACC GCCGAGCAGG CGCAGGCGCT CGGCATCGTC
AGCCGCGTGG TGCCCGATGC CGAGGTCGAA TCCGCCACGC GCGAGCTGGC GCTGTCGTTG
GCACAGGGCC CGACCGTGAC GCTCGGATAC ATCAAGACCA ACATCAACAA CGCCGAAACC
CTGTCGCTCG AAGCCTGCTT CGACGCCGAG GCGCTACATC ACTCGCGCTG CGCTGAGACT
GCCGACCACA AGGAAGCCGC TGCCGCCTTC GTCGAGAAGC GCGCGCCGGT GTTCCAGGGC
CGCTGA
|
|---|
| Protein sequence | MTDIVLQDLD RGLLTITMNR PDRRNALNQD MIRGLVEAAH RAKDDPEVRA VLLKGGGTFC
VGGDVKSMAA AGAPPPLEQK VANLRRGMEV SRLLHQMPKP VVAQIDGAAA GAGLSMALAC
DLRVAGASAK ITTAFAKVGL SGDFGGTYFL TQLIGAAKAR ELYLTSPVLT AEQAQALGIV
SRVVPDAEVE SATRELALSL AQGPTVTLGY IKTNINNAET LSLEACFDAE ALHHSRCAET
ADHKEAAAAF VEKRAPVFQG R
|
|---|
| |