Gene Rpal_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0334 
Symbol 
ID6407980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp352519 
End bp353142 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content66% 
IMG OID642710244 
Productheat shock protein GrpE 
Protein accessionYP_001989370 
Protein GI192288765 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0184084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAGA CTGATGGACA GAAGGACAAC AACCAGGACA CGGCGCAGGC CGCCGCCGAT 
CCGGTCGTTT CCAAGCCGTA CATCATGCCG GACGACCCGG AAGAAGGATC GAACGAGGCA 
CTGGTGCGCG AGGCTGCGGA TGCGCGCGAC AAGATGCTGC GTACGCTCGC CGAAATGGAG 
AACCTGCGGA AGCGGACCCA GAAGGAAGTC GCCGACGCTC GCACCTATGG GGTGACCTCG 
TTCGCGCGCG ACGTGCTCGA TATCGCCGAC AATCTGCAGC GCGCGCTCGA TGCGGTGCCG 
GCCGAGGCCC GCGCCAATGC CGAGCCCGGG CTCAAGGCGT TGATCGAGGG CGTCGAGCTG 
ACCGAGCGCT CGCTGCTCAA CGCGCTCGAA AAGAACGGCG TCAAGAAGTT CGACCCGAAG 
GGCCAGAAGT TCGATCCGAA CTTCCAGCAG GCGATGTACG AAGTGCCGGA TCCGTCGGTG 
CCGGCAGGCA CCGTCGTGCA GGTGGTTCAG GCCGGCTTCA CGATCGGCGA CCGCGTGCTG 
CGTCCGGCGC TGGTCGGTGT CGCCAAGGGC GGCGCCAAGG CTGCGCCGAG CGATGGCGGC 
AGCGAGACCG GCAACCTCAA CTGA
 
Protein sequence
MTETDGQKDN NQDTAQAAAD PVVSKPYIMP DDPEEGSNEA LVREAADARD KMLRTLAEME 
NLRKRTQKEV ADARTYGVTS FARDVLDIAD NLQRALDAVP AEARANAEPG LKALIEGVEL 
TERSLLNALE KNGVKKFDPK GQKFDPNFQQ AMYEVPDPSV PAGTVVQVVQ AGFTIGDRVL 
RPALVGVAKG GAKAAPSDGG SETGNLN