Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0246 |
Symbol | |
ID | 6407890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 261654 |
End bp | 263204 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642710154 |
Product | signal recognition particle protein |
Protein accession | YP_001989282 |
Protein GI | 192288677 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGATA ATCTCTCGGA TAAGCTGGGC GGTATTCTCG ATCGGCTGAC CGGGCGCGGT GCGCTCAGCG AGGCCGATGT CGATGCGGCG ATGCGCGAAA TCCGCCGCGC GCTGCTGGAA GCCGACGTCG CCCTCGAAGT GGTGCGCTCG TTCACCGAGC GGGTCCGCGA GCAGGCCGTC GGCGCCACCG TCGTCAAGTC GGTCAAGCCC GGCCAGATGG TGGTCAAGAT CGTCAATGAC GAGCTGATCG CCACGCTGGG GTCGGAAGTC CAGTCGATCG ACCTCAACGC CGTGCCGCCG GTGCCGATCA TGATGGTCGG TCTGCAGGGC TCGGGTAAGA CCACCACCAC CGCCAAGCTG GCGCGCCGCA TGACCGAGCG CGACAAGCGC AAGGTGCTGA TGGCCTCGCT CGACGTCTAT CGTCCGGCCG CCATGGAGCA GCTCGCGGTG CTCGGCCGCG ATCTGCAGAT CGACACGCTG CCGATCGTCG CCGGTCAGCA ACCGCCGGAT ATCGCCCGGC GCGCGATGGA AGCCGGCAAG CTCGGCGGTT ACGACGTCGT GCTGCTCGAC ACCGCCGGCC GCACCACGCT CGACGAAGAC ATGATGGCCG AGGCGGCCGA AATCAAAGCC GCCGCGAACC CGCACGAAGT GCTGCTGGTC GCCGACAGCC TGACCGGTCA GGACGCCGTC AATCTCGCCC GCGCGTTCGA TCAGCGCGTC GGCCTCACCG GCATCGTGCT GACCCGAATT GACGGCGATG GTCGCGGCGG TGCCGCGCTG TCGATGCGCG CCGTCACCGG CAAGCCGATC AAGCTGATGG GCACCGGCGA AAAGACCGAT GCGCTCGAAG ACTTCCATCC GAGCCGGATC GCCAGCCGCA TTCTCGGCAT GGGCGACATC GTCTCGCTGG TCGAAAAAGC CGCCGCGACG CTGGACGCCG AAAAGGCCGC CGCCGTCGCC GAGAAGATGC GCAAGGGCAA GTTCGATCTG ACGGACTTGC GCGATCAGTT GCTGCAGATG ACCAAGATGG GCGGCATCGG CGGCCTGATG GGCCTGATGC CCGGCATCTC CAAGATGAAG AACCAGATCG CCGCCTCCGG CATCGACGAC AAGGTGCTCA AGCGCCAGGT CGCGATCATC GATTCGATGA CCCGCGAGGA GCGCAAGAAC CCCGACATCC TCAAGGCCAG CCGCAAGAAG CGCATCGCCG CCGGCGCCGG CATCAAGGTC GAGGACGTCA ACAAGCTGCT GAAGATGCAT CGCAACATGG CCGACATGAT GAAGGCCGTG GGTCGCGGTA AGGGCGGCCC GATGGCCGGC TTCGCCAAGG CGATGGGCTT CGGCGGTGGT CTGCCCTCGC CCGACGAGAT CAAGGCGATG CAGGAAAAGA TGAAGAGCGG CGACATGCCC GAAGGCCTGC CGGAGCTGCC GAAGGACCTG CCTGCCTCGT TGCGTGGCGG CATGCCCAAT CTGCCCGGCC TCACCGGCCT GGCCGGCAAG CCGACGCTGC CCGGCCTCGG CGGCTTCCCG GGATTCGGGA AGAAGAAATG A
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Protein sequence | MFDNLSDKLG GILDRLTGRG ALSEADVDAA MREIRRALLE ADVALEVVRS FTERVREQAV GATVVKSVKP GQMVVKIVND ELIATLGSEV QSIDLNAVPP VPIMMVGLQG SGKTTTTAKL ARRMTERDKR KVLMASLDVY RPAAMEQLAV LGRDLQIDTL PIVAGQQPPD IARRAMEAGK LGGYDVVLLD TAGRTTLDED MMAEAAEIKA AANPHEVLLV ADSLTGQDAV NLARAFDQRV GLTGIVLTRI DGDGRGGAAL SMRAVTGKPI KLMGTGEKTD ALEDFHPSRI ASRILGMGDI VSLVEKAAAT LDAEKAAAVA EKMRKGKFDL TDLRDQLLQM TKMGGIGGLM GLMPGISKMK NQIAASGIDD KVLKRQVAII DSMTREERKN PDILKASRKK RIAAGAGIKV EDVNKLLKMH RNMADMMKAV GRGKGGPMAG FAKAMGFGGG LPSPDEIKAM QEKMKSGDMP EGLPELPKDL PASLRGGMPN LPGLTGLAGK PTLPGLGGFP GFGKKK
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