Gene Rpal_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0174 
Symbol 
ID6407818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp189192 
End bp189752 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content62% 
IMG OID642710084 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_001989212 
Protein GI192288607 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCATCTG AAGATCCATC GGTTTCCGGA GTCTCCGGTC GTTACGCGAC CGCTTTGTTT 
GAACTGGCCC GCGACGAGAA ATCCATCGAT GCGGTGACGG CCGATCTGGA CAAGTTCAGC 
GCCATGCTGG CGGGCAGCCC CGATCTGGTT CGCCTGGTCC GCAGTCCGGT GTTCGCCTCC 
GAGGTGCAGG GCAAGGCGCT GGCCGCAGTG CTCGACAAGG CGGGCATCAC TGGCATCAGC 
GCCAATTTTC TGAAAGTGCT CGCGGCCAAC CGCCGGCTGT TCGTGGTCGC AGACGTGATC 
CGCGCCTATC GCGCGCTGGT CGCCAAGTTC AAGGGTGAGG CGACCGCCGA CGTGACCGTG 
GCCGAGAAGC TCAGCGACAA GAATCTCGAA GCGCTGAAGG CGGCGCTGAA GTCGGTGACC 
GGCAAGGACG TCGCCCTCAA TATCAATGTC GATCCGGCGA TCATCGGCGG GCTTGTCGTC 
AAGCTCGGTA GCCGCATGGT CGACAGTTCG CTCCGCACCA AACTCAATTC GATCAAGCAC 
GCGATGAAAG AGGCAGGCTG A
 
Protein sequence
MASEDPSVSG VSGRYATALF ELARDEKSID AVTADLDKFS AMLAGSPDLV RLVRSPVFAS 
EVQGKALAAV LDKAGITGIS ANFLKVLAAN RRLFVVADVI RAYRALVAKF KGEATADVTV 
AEKLSDKNLE ALKAALKSVT GKDVALNINV DPAIIGGLVV KLGSRMVDSS LRTKLNSIKH 
AMKEAG