Gene Rpal_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0114 
Symbol 
ID6407757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp126442 
End bp127104 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID642710023 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001989152 
Protein GI192288547 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.621262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCCCAC GCGAGCAGAC ACGTGAAGAG CTCCGTCAGA AGATCATCGC CGGCGCGCGC 
GCGTTGCTGT CCGAAACCGA ATCGGCGGAA TTTTCGATGC GGGCGCTGGC CGCCCGGGCC 
AACGTCGCAC ATATGACGCC CTACAACGTG TTCGGCTCGA AGCAAGCCGT GCTGCTCGCG 
GTGCTGGATG CCGACATGGC CGACTTCACC CGCGCGGTAC AGGAGCGCGA CGTCGCCGAT 
CCGCTGTCCG AACTCTATGA AGTGGTCGGC CTGTGCGCCG AGTTCTGGTT TTCCGAGCCG 
GTGTTCTACA AGACGCTGTA TCGCGAACTG CTCGACTTGA AGGGCGCGCC GCATCAGGCG 
ACGGCCACGC CGCTTCGCGA CGGATTCTGG CGTCGTCTGA CGCATGCGTT GGCGGAGCAG 
GGCTATCTGC AGTCTTTCGT CGCCGAGGAG CCGCTGTCGA TGAACCTGCG CCGCATCGCC 
CTGCAGGCGA TCAGCGTCTG GATCGCCCGC GATCTGTCGA AACGGGAAGT CGAGGCCGAG 
CTGGGTTATA GCATTTCGTT GGCTCTGCTC GGCGTCACCG CGCCAGCCTC GTCCTCCCTC 
GTACTAACGC GACTGCTAAA CTACCAAGCC ATAATTGAAG AGGCGGGTGC TCGAGACGGA 
TAG
 
Protein sequence
MPPREQTREE LRQKIIAGAR ALLSETESAE FSMRALAARA NVAHMTPYNV FGSKQAVLLA 
VLDADMADFT RAVQERDVAD PLSELYEVVG LCAEFWFSEP VFYKTLYREL LDLKGAPHQA 
TATPLRDGFW RRLTHALAEQ GYLQSFVAEE PLSMNLRRIA LQAISVWIAR DLSKREVEAE 
LGYSISLALL GVTAPASSSL VLTRLLNYQA IIEEAGARDG