| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0109 |
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| Symbol | |
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| ID | 6407752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 119809 |
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| End bp | 121350 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642710018 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001989147 |
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| Protein GI | 192288542 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.290721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCACGCA CGCCTAATGG CGGTGCAATT GCCTGCTCAG ATGCCGCCGC ATTAGGCAAA
GACGAGTTGT TCTGGGGCGC GTTGTTTCGC GGCCTCAACC GCGGCGGCTC TTTCCTGCAA
TTGCAGATTC GCCAGATCAT CGTGACGGCG ATCGAGGATG GCCGCCTACC GCTCGGCATG
AAGATGCCGT CCAGCCGCGA TCTCGCCACC GTGCTGAAGG TGTCACGTAA CACCGTGGTG
ATCGCTTACG AGCAGCTCGT CGATCAGAAC TTTCTGGTTT CGCGGCAGCG CAGCGGTTAC
TTCGTCGCCG GCCTGCCGAA GAAATTCGCC ACCGAAGCGC CCGGCCTCGC CGAGGTCACC
AGCCGCGGCG ACGAACACTG GGTCGATCGC TTCGCGGTGA GGCCGTCGGC GCATCGCAAC
ATCGTCAAGC CGCTCGACTG GCAGACGCAT CCCTACCCGT TCATCTTCGG CCAGTTCGAT
CCGAGTCTGT TTCCGACCAA CGACTGGCGC GAAAGCGCCC GCGCCGCGCT CAGCGTTCCG
GAAATCAACA ACTGGGCCCG CGACCTGATC GACGGCGATG ATCCGGCGCT GATCGAGCAG
TTACAGCTTC AGGTGCTGCC GCGCCGTGGC ATCCACGCCC GAGCCGACGA GATCATGATG
ACGATCGGTG CTCAGCACGC GCTGTATCTG ATCGCGACGC TGTTCATTAA CGGCCAGACC
AAGGTCGGCA TCGAAGAGCC GGGCTATCCG GACGCCCGCA ACATCTTCCG GATGCTGACG
CCCAACGTGG TGCCGCTTTC CGTCGACAGC GAAGGGCTGG TGCCGGACGC GATGTTCCAG
AGCTGCGCGC TGGCTTATGT CACCGCCAGC CATCAGTGCC CTACCGCCGT GACAATGCCG
CTGCCTCGCC GCATCGAGCT GTTGAAAGCC GCTGCGACCG GCGACGTGGT CGTGGTGGAG
GACGATTACG AAGGCGAATT GATGCCGGAA TCGGCGACGC TGCCGCCGCT GAAGAGTATC
GATCGCGCCA GCAACGTCCT CTATGTCGGC AGCCTGTCGA AGGCGCTGGC ACCGGGCCTG
CGGCTCGGTT ACGTCGTCGC TCCCGCCCCG GTGATCCGCG AATTGCGCGC CCTGCGTCGG
CTGATGCTTC GGCATCCGCC GCTCAACAAT CAGCGCGTCG CCGCGCTGTT CATCGGCCTC
GGCCACTATC GGGCACATCT CGCCCAAGTC GGCCGCGTGC TGCTTGAACG CGCCAAACTG
CTCGACCAGT TGCTACCGAA GCATCTGCCG AGTTGCAGTT TTTCGCGCGG TCCGGGCTCG
ACCAATTTCT GGGTGACCTG CCCGACTTCG ATCGACGCGA CCGCTCTGGC CCAGGCGGCG
CTCGAACAGG GCGTCGTGAT CGAACCCGGC GCTGTGTTCT CGATGGACGA AACCGCGAGC
CGGCACTGCT TCCGACTCGG TTTCTCGTCG ATCCGCACGG ACCGGATCGA GGTTGGCATC
CAGCGCCTCG GCGAAGTTAT CGCCCAGCAT CTGAAGGCCT AG
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| Protein sequence | MARTPNGGAI ACSDAAALGK DELFWGALFR GLNRGGSFLQ LQIRQIIVTA IEDGRLPLGM
KMPSSRDLAT VLKVSRNTVV IAYEQLVDQN FLVSRQRSGY FVAGLPKKFA TEAPGLAEVT
SRGDEHWVDR FAVRPSAHRN IVKPLDWQTH PYPFIFGQFD PSLFPTNDWR ESARAALSVP
EINNWARDLI DGDDPALIEQ LQLQVLPRRG IHARADEIMM TIGAQHALYL IATLFINGQT
KVGIEEPGYP DARNIFRMLT PNVVPLSVDS EGLVPDAMFQ SCALAYVTAS HQCPTAVTMP
LPRRIELLKA AATGDVVVVE DDYEGELMPE SATLPPLKSI DRASNVLYVG SLSKALAPGL
RLGYVVAPAP VIRELRALRR LMLRHPPLNN QRVAALFIGL GHYRAHLAQV GRVLLERAKL
LDQLLPKHLP SCSFSRGPGS TNFWVTCPTS IDATALAQAA LEQGVVIEPG AVFSMDETAS
RHCFRLGFSS IRTDRIEVGI QRLGEVIAQH LKA
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