| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0007 |
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| Symbol | |
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| ID | 6407648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 8982 |
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| End bp | 10430 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642709914 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001989045 |
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| Protein GI | 192288440 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.489749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCGG TCTCGGCGCT GAGCAGGGCG GAACTGGAAG CCCGGCTTGA GGAGGCCGAG
GAGACGCTGC GGGCGATCCG CGACGGCGAA ATCGACGCGG TCGTCGTTCG CGCCGCCGAT
GAAGAGCAGG TGTTCACGCT CGAAGGTGGC GGCCAGTCCT ATCGCACCTT CATGGAAACG
ATGGATGTCG GTGCCGCGGC GTTCGATCAG GACGGCCAGC TGCTCTACGC CAACCAGGCG
CTGTGCGCGC TGCTCGATTG CGCCCACGGC TCGCTCACCG CTTCTGCTCT GATCGCGTTG
CTCGATCCGG CCAATCAGGC GGCGTTCCGG CGCCTTTTGG CGCAGGCCCA GCGCGAACGG
CAATCGGCCG AAATCCATCT ACGGGTCGGC GATGCAGAGC GCAGCATGCT GCTCACCGGC
ACGCCCTTGG AGTTCGGCAT CGTCCACGGC GCGGCGATCA CCTTCACCGA CATCAGCGAG
CGCGAGCAGG CCGCCGCCGC CCGCGAATCC GAGCGGCTGG CGCGCGCGAT CCTGGCCTCG
GCCAATGAAG CGGTGATCGT GTGCGACCGC GCCGGCCGCG TCACCCATCT CAACGGCGCG
GCGATGCGGA TCTGCGCCGA GGCGCCGGTC GGCAAAACCT TTGCCGAGGC GATCGCGCTG
AGTTTTCCCG AAGCTTCCGA ATTGATGAGC AGCGACGACA TCGTCACGAT GGCGACCGCG
GGCTTGCCGG TGCAGGGGCT GGAGGCGGCG GTCCGCATCC CGTCGGCCGC GATCACCGAC
GTGATGATCA GCGCCGCGCC GCTGGTGGTG TCCGGCGAGC GCACCCAGGG CTGCGTCGTC
ACCCTGGTCG ATCTGTCGCA GCGTAAGGCC GCCGAGCGGC ACCAGGCGCT GCTGATGGGC
GAGCTCGACC ATCGCGTGAA GAATACGCTC ACCATGGTAA TGGCGATCTG CGCCCGCACC
GCCGCGCACG AGCGCACCAT CGAGGATTTC CAGAAATCCT TCACCGGCCG GATTCAGGCG
CTGGCGGCGA CTCACACGCT GCTGTCGAAC GCCTCGTGGC AGAACCTGCA TATTCGCGAT
GTGCTTGCCG CCGAGCTGGC GCCGTTCGCC TCGCTGTCGA GCGGCCGCAT CGTCACCGAC
GGTCTCGACA TCGCGGTCGA CGCCAAGACC GCGGTGTCGC TCGGGCTGGT GTTTCACGAA
CTCACCACCA ACGCCGTGAA ATACGGAGCC CTGTCAGTGC CGTCAGGGCG GATCTCGGTG
CGCCGGGTCG GCGCCACCGA CGAGGCGCTG ACGATCGAAT GGCAGGAGCA CGACGGCCCG
CCGGTGACGC CACCGCAAAG CTCCGGCTTC GGCCAGACGC TGATCTCCCG CAGCCTCGGC
AATGGCGGCG CCAAGTTGGA ATTTGATCCC GCCGGCGTGG TTTGCCAGAT CTCGATTCCG
AGGAGCTGA
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| Protein sequence | MSAVSALSRA ELEARLEEAE ETLRAIRDGE IDAVVVRAAD EEQVFTLEGG GQSYRTFMET
MDVGAAAFDQ DGQLLYANQA LCALLDCAHG SLTASALIAL LDPANQAAFR RLLAQAQRER
QSAEIHLRVG DAERSMLLTG TPLEFGIVHG AAITFTDISE REQAAAARES ERLARAILAS
ANEAVIVCDR AGRVTHLNGA AMRICAEAPV GKTFAEAIAL SFPEASELMS SDDIVTMATA
GLPVQGLEAA VRIPSAAITD VMISAAPLVV SGERTQGCVV TLVDLSQRKA AERHQALLMG
ELDHRVKNTL TMVMAICART AAHERTIEDF QKSFTGRIQA LAATHTLLSN ASWQNLHIRD
VLAAELAPFA SLSSGRIVTD GLDIAVDAKT AVSLGLVFHE LTTNAVKYGA LSVPSGRISV
RRVGATDEAL TIEWQEHDGP PVTPPQSSGF GQTLISRSLG NGGAKLEFDP AGVVCQISIP
RS
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