| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0003 |
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| Symbol | recF |
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| ID | 6407644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3234 |
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| End bp | 4373 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642709910 |
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| Product | recombination protein F |
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| Protein accession | YP_001989041 |
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| Protein GI | 192288436 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCG CCCGCATCAC ACGCCTGACG CTGACGCATT TTCGGAATTA TCGCGGGGCG
TCGCTGACCA CGACCGCCGA CCAGGTGGTG CTGGTCGGGC CGAACGGGGC TGGCAAGACC
AATTGCCTGG AGGCGATCTC ATTTCTGTCG CCGGGCCGCG GCCTGCGGCG GGCCACGCTG
GAAGACGTCG CCAACCATGA GGGCGACGGC TCCTGGGCGG TATCGGCCGA GGTCGAAGGC
GCGCTCGGGC TGGCGACGCT CGGCACCGGG ATCGAGCCGC CGCGCGGCGA TACCCCCACA
ACGCGGCGCT GCCGGATCGA CCGCGAGCCG GTCGGATCGG CGGCGGCGTT CGGCGACCAT
CTGCGCATGG TGTGGCTGAC GCCGTCGATG GACGGGCTGT TCATGGGCGC GGCCTCGGAA
CGCCGGCGAT TTTTCGACCG CTTGGTGCTG GCGATCGACA GCGGCCATTC GGCCAGGGTC
TCCGCGCTCG ATCGCAGCCT GCGGTCGCGC AACCGCCTGC TGGAAGACAT CCGCAACGCC
GACTCGCACT GGCTCGACGC GATCGAGCGC GAAACAGCCG AGCTGGCGAT CGCGGTGGCG
GCCCAGCGCG GCCAGACCGC GCTCAAGCTC GCCGCGATGC TCGATGCCCG TGGCGCCACC
TCGGCCTTTC CGTCCGCCAA GCTCATGCTC GACGGCTGGA TGGAGAACGC GCTGACCTCC
GAGCCGGCAA CCGCGGTGGA AGACCGCTAT CGCGCCATCC TGCGCGACAG CCGCGGACGC
GACGCCGCCG CTGGCCGGAC GCTCGACGGC CCGCACCTCA CCGATCTCGA AGTGATCTAC
GCACCCAAGG CGATGCCGGC GCGCGATGCC TCCACTGGCG AGCAGAAGGC GCTGCTGATC
GGCCTGGTGC TGGCGCACGC GCAGCTCGTC GCCGAGACCA CTTCGATCAC GCCGCTGCTG
CTGCTCGACG AAGTGGTGGC GCATCTCGAT CCCGGCCGAC GCGAAGCGTT GTTCACCGAG
CTCGGCAAGC TCGGCGCGCA GGTCTGGATG ACCGGCGCCG ATCCTATGGC GTTCGCCGAA
ATCGGTCCGG CTGCGGGCAT TTTCGACGTC GAGAGCGGAC GAATCAGGCC GCGCGGATGA
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| Protein sequence | MTAARITRLT LTHFRNYRGA SLTTTADQVV LVGPNGAGKT NCLEAISFLS PGRGLRRATL
EDVANHEGDG SWAVSAEVEG ALGLATLGTG IEPPRGDTPT TRRCRIDREP VGSAAAFGDH
LRMVWLTPSM DGLFMGAASE RRRFFDRLVL AIDSGHSARV SALDRSLRSR NRLLEDIRNA
DSHWLDAIER ETAELAIAVA AQRGQTALKL AAMLDARGAT SAFPSAKLML DGWMENALTS
EPATAVEDRY RAILRDSRGR DAAAGRTLDG PHLTDLEVIY APKAMPARDA STGEQKALLI
GLVLAHAQLV AETTSITPLL LLDEVVAHLD PGRREALFTE LGKLGAQVWM TGADPMAFAE
IGPAAGIFDV ESGRIRPRG
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