| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4591 |
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| Symbol | |
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| ID | 5211577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5750925 |
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| End bp | 5751566 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640598170 |
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| Product | Allergen V5/Tpx-1 family protein |
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| Protein accession | YP_001278872 |
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| Protein GI | 148658667 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.39255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTGTT CTTTACCCTA CGCTCTTCGT ATTACCCTTC TGCTGCTTAT CGCTGTGCTG
GCGCTGACAA CGCCGACGCT CTTCGCCCAG ACGACGACCG ATTTCCCCTC CAGCATTGGT
GAACCGGCCA CAACTGATGA TACGCTGAGC TCCATCCACT CAGAGACGAG CAATGCGCCC
ATGGCGAGCC ACACAGCGTA TCTGCCGCTC GTGCTCAAAC CAGGGACAAC GGATAGCAGC
AACTCGAGCG TTCTGCCGCC GCTGGCGCAG CAGGTGGTCG ATCTCACCAA TGCGTACCGT
GTTGCAGCAG GATGCGCGCC GCTCGCAGTG TCGCCGCAAC TCACTGCGGC AGCGGCAGCT
CACAGCCAGG ATATGGCGCA GAACAACTTC TTCAGCCACA CCGGCTCAGA CGGTTCCACA
CCCTGGGATC GAATCAGGCG AACCGGGTAT TCCTACCGGA GTGCGGCTGA GAACATCGCC
GCCGGTTACC GCACTGCCGG GGATGTGGTG CAGGGATGGT ATAGCAGCCC CGGACATCGA
CAAAATATGC TGAACTGTGA TCTGCGCGAA ATTGGGGTCG CCTATGCCGA TGGCGGATCG
TATGGAAGAT ACTGGACGCA GGTATTCGCA ACTCCACGCT AG
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| Protein sequence | MHCSLPYALR ITLLLLIAVL ALTTPTLFAQ TTTDFPSSIG EPATTDDTLS SIHSETSNAP
MASHTAYLPL VLKPGTTDSS NSSVLPPLAQ QVVDLTNAYR VAAGCAPLAV SPQLTAAAAA
HSQDMAQNNF FSHTGSDGST PWDRIRRTGY SYRSAAENIA AGYRTAGDVV QGWYSSPGHR
QNMLNCDLRE IGVAYADGGS YGRYWTQVFA TPR
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