Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4447 |
Symbol | |
ID | 5211432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5571198 |
End bp | 5572292 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640598026 |
Product | glycosyl transferase family protein |
Protein accession | YP_001278729 |
Protein GI | 148658524 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.145063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGAAG GTGATGTCAG CGTCGGACAG GCATCGCGCA CGCACGAGAC GCGCGATACA CGTATGGCGA TTCCCACCGA CGATCCTCAG GCGGCGCTGG CGTTCTGTCG CCGGCTGGCA GGGTTGCTCA TAGATCATTC CGACAATGGC GTCATGCCGC CGTCGCGTCC ACATCTCTCT GTTGTCTTGC CAGTCTTCAA CGAGCGCGAA AACCTGCCTG CGCTCTACGA ACGGTTGGTA CGCGTGCTCG ATGCCGGGAA CCACTCGTAT GAACTGGTGT TTGTCGATGA TGGGAGCCGC GACGGGAGCC GTGATGTGTT GTACGCCCTT GCAGAACGCG ACCCGCGCGT TGTCGTTGTC GAACTGGCGC GCAATTTCGG GCATCAGATC GCAATCAGCG CCGGGCTGGA CTATGCGCGC GGCGATGGCG TGATTGTGAT GGATTCGGAT TTGCAGGATC CGCCGGAGGT GCTGCCGGAG TTCATCGCAC GCTGGCGCGA GGGGTACGAT GTGGTCTACG CGGTGCGCGC GAGCCGGAAG GAGAATCTGC TGCTGCGGGC GGCATATGCG CTGTTCTACC GCCTGTTGCG ATGGATTGCC AATATTGATA TTCCCCTCGA TGCTGGCGAT TTTTGCCTGA TGGACCGGCG GGTGGTGGAT GTGTTGACCG CCATGCCGGA ACGCAACCGG TTTGTGCGCG GCATTCGCAG TTGGGTGGGG ATGAAGCAGA TCGGGTTGCC GTATGATCGG CAGGGACGTT ATGCCGGAAA GCCGAAGTAT ACGTTGAGCC GATTGACCTA TCTGGCGATC GACGGAATCG TGGCGTTCAG TTTTGTGCCG CTGCGGATCA TCACCATTCT TGGCTTCATT GTTTCTGCCG TGTCGATTGC ACTGGCGATC CTCTATACCG TGCAGCGCCT GGCGTTTGGG TTGACGCCGC CTGGATTTCC AACGTTGATC GTGGCTATTT TCTTCCTGGC AGGCATTCAA CTGATCACCA TCGGCGTCAT TGGTGAATAT GTGGGGCGTA TTTATGAAGA AGTGAAACAA CGCCCGCTGT ATGTGGTTCG ACGTGTGACG GGGAGGATGG GTTGA
|
Protein sequence | MSEGDVSVGQ ASRTHETRDT RMAIPTDDPQ AALAFCRRLA GLLIDHSDNG VMPPSRPHLS VVLPVFNERE NLPALYERLV RVLDAGNHSY ELVFVDDGSR DGSRDVLYAL AERDPRVVVV ELARNFGHQI AISAGLDYAR GDGVIVMDSD LQDPPEVLPE FIARWREGYD VVYAVRASRK ENLLLRAAYA LFYRLLRWIA NIDIPLDAGD FCLMDRRVVD VLTAMPERNR FVRGIRSWVG MKQIGLPYDR QGRYAGKPKY TLSRLTYLAI DGIVAFSFVP LRIITILGFI VSAVSIALAI LYTVQRLAFG LTPPGFPTLI VAIFFLAGIQ LITIGVIGEY VGRIYEEVKQ RPLYVVRRVT GRMG
|
| |