Gene RoseRS_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4340 
Symbol 
ID5211324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5455239 
End bp5455685 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content61% 
IMG OID640597924 
Producthypothetical protein 
Protein accessionYP_001278628 
Protein GI148658423 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0513206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000823038 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGCAGGAC GTTCACAATC AATCACGGCG CCGCGCACCT TCACCCGCAA AGCGACCGGT 
CTGGTGCGCC AGGCAGGCAT CTTCGACGTG CTGGTGTACA ACGTCAACTT TATCAGCGTC
GGGTTGATGG TCGCACTGAT GGTGCTGATC ATCCCATCGT ATGCTGGCGG CAACATCTAC
CTTTCGCTCC TCTTCTGCGC ACTGCTGGCG CTGCCAACCG CCTGCGTCTA TGCCTTTCTC
TCGGCAGCAA TGCCGCGCAG CGGCGGCGAC TATGTCTATG TGAGCCGTGT GCTCGGTCCG
GCGGCAGGCA TGATGGGCAG CTGGAACATG ACGATCTGGT GGATCCTGTA CGGCGGTGTG
CCATCGGCGT TTCTGGCAAC CTACGGCGTT GCGCCGTTCT GCCGCGTGCT TGCAGCGATG
ACGGGCAATA CCGGGCAAGA TGGATGA
 
Protein sequence
MAGRSQSITA PRTFTRKATG LVRQAGIFDV LVYNVNFISV GLMVALMVLI IPSYAGGNIY 
LSLLFCALLA LPTACVYAFL SAAMPRSGGD YVYVSRVLGP AAGMMGSWNM TIWWILYGGV
PSAFLATYGV APFCRVLAAM TGNTGQDG