| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4098 |
|---|
| Symbol | |
|---|
| ID | 5211081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 5138891 |
|---|
| End bp | 5139298 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640597686 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001278392 |
|---|
| Protein GI | 148658187 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2445] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.272071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTG ACGTGCTCTT ACGCAAACTG GCGTACCTGC GGCGATTGTT GCGCGATCTT
GCGCCATTTG CGCAGATGAG TCGCGATGAG ATAGAGAAGC AGCACTATAC GGTTGAGCGT
ATTCTGGAAT TGCTGGTTGG CGCCGCAGCA GATCTAACCT TTCACATCCT GGCTGAACGC
GGTCTGACGC CGACATCGGA TCGAGAGTCG TTTCGTCTGG CAGCGCAGGA AGGGTTGCTT
CCAGGCGATC TGGCGGAACG GTTACAGCAG GCGGCGGGGA TGCGCAATAT TCTGGTACAT
CTGTACGAAA CAATCGATTA TGCCGTCCTT CATGCCAGTA TTGCGCCAGC GCTTCACGAT
TTCGCGCTGT TTGTCGCCGT AGCGGAACAG TGGGAAACAT CGGAGTAG
|
|---|
| Protein sequence | MARDVLLRKL AYLRRLLRDL APFAQMSRDE IEKQHYTVER ILELLVGAAA DLTFHILAER
GLTPTSDRES FRLAAQEGLL PGDLAERLQQ AAGMRNILVH LYETIDYAVL HASIAPALHD
FALFVAVAEQ WETSE
|
|---|
| |