| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4013 |
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| Symbol | |
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| ID | 5210996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 5020494 |
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| End bp | 5021105 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597602 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001278308 |
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| Protein GI | 148658103 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0332681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAGT GGATGCTGTT TGCGCTGATC GTTGTTGCGC TTATCCTGCC ATTCATTGGC
GCAATTGCGC TACGGTTAAC ACGGCAACGC CTGGAGGAGC GGGAGCGTCT CGCGCTGGCA
ATCATTGTGT TCGGTGCAGC GTTCGGTGCA GTGTTCGTCC TGGCGCGCAG CGATATATCC
AGCCTGCGTA TTGCCGGTCT GACGGTTATG CAACCGATCG CACCGCCTGT CGCCCCCGCG
TCGCAACCGC CGGCAATCGC CCCGACGGTG AATGTTCCAC CGGTGACTCC AACCGCGACG
CTGGAACCGA CAGTGACGCT GGAATCGACA GTGACGCCGG AACCGACAGC AACGCTGGAA
CCGACGGCAA CGCTGGAACC GACGGTGACG CCGGAACCGA CAGTGACGCC GGAACCGACG
GTGACGCCAG AACCGACCGC GACGCTGGCG CCACAGTCGG GTTCACGACG GTATGTGGTG
CAACCGGGAG ACACGTTGCG CGCAATCGCC GAGCGCAACG GCGTGACAGT TGAGGCGCTT
CTGCGCGCCA ACAATCTGAC GCCAGCCGCT GCCGATAATC TGCGTGTTGG ACAGGAGTTG
ATCATTCCAT GA
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| Protein sequence | MPQWMLFALI VVALILPFIG AIALRLTRQR LEERERLALA IIVFGAAFGA VFVLARSDIS
SLRIAGLTVM QPIAPPVAPA SQPPAIAPTV NVPPVTPTAT LEPTVTLEST VTPEPTATLE
PTATLEPTVT PEPTVTPEPT VTPEPTATLA PQSGSRRYVV QPGDTLRAIA ERNGVTVEAL
LRANNLTPAA ADNLRVGQEL IIP
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