| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3910 |
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| Symbol | |
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| ID | 5210893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4894318 |
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| End bp | 4897776 |
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| Gene Length | 3459 bp |
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| Protein Length | 1152 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640597506 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_001278213 |
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| Protein GI | 148658008 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGA CCGATCATCC GCCGCCAGAA CCGTCGCGCG ACCACGAAGT GCTGGCATTT
CCTTCATTTG CAGCGCTGCG TGCAGCGCAC GCCGAGATGC TGCGTCGCCT CCACGAAGAG
GGATTGACGA CTGCACTGCT GAGTCGGGCG GCTGAGATGA TTGCGCGCGG CAGCGCCACC
GGCGTGATCC TCGACGATGA AGACGAACGC ACCGCTGCGC AGAGTTTGCT CGATTATTGG
GCGACAATCC TTATCCGTAA GGGATATGAG CCTCCCGACG CCACTCTCGA TGAGTTCGAT
CCTTCCCTCG CGCCGGAATT GGACGACTCA CAATGCCCTT ACGTCGGGCT GGATCCATTC
CGTGAAGAGG ATGCAGCGCG CTTCTTCGGC AGACGCCGCC TGGTCGAGTT CCTCGTCGCT
CGCCTGACCG AACACCGCAT GCTGGCGCTG GTCGGTCCTT CTGGTTCCGG CAAATCATCC
GTCGTGCGCG CCGGTCTCAT TCCGGCGCTG AAGCAGAATG CTATTCCTGG CAGCAGCGCC
TGGCGATACA TACCCATCAT TACGCCTGGC GAACAACCCC TGTTCCACCT GGCGCATGCG
TGGCGCCGGT TGAATGGTCA ACCCGACGAC CAGGCGCAGA GTGAAGAACT TGCGGAACGG
TTCCGCGATC CGCAGCAGGT GGTCGCTGCA TTCGACGGGA CTGAGGCGGT AGTGCTGGTG
GTCGATCAAA TGGAGGAATT GTTCACCCTC ACCGACGACG AATCGGAGCG TCGCGCATTC
GTGGCGGCGA TGGTGGCGCT GGTCGAGCAC CCATCACCCC GGCATACGGT CATCACGACG
CTGCGCAGCG ACTTCGAGAG TTTTATTGCG CTCGAACCGG CGTTGCAACA GTGGATGGAA
CAGGCGCGCG TTCAGTTGCT GCCGCTCAGC GCCGGTGAAA TGCGTGAAGC GATCGAACGC
CCGGCGGAAC TGGTCGGTCT CAAGTTCGAA CCGGGCGTCG TCGAAGCGCT CCTGCACGAT
ACGCTCGGCG AACCGGCAGC GTTGCCGCTG CTCCAATTTT CGTTGCTCAA ACTGTGGGAC
GCGCGCGACC GCAATCGGGT GACCTGGCAG GCGTACCAGC AGATCGGCGG CGGGCGACAG
GCGCTGGCGC GCAGCGCCGA TGCGCTCTAC AACAGCCTGA TCCCGGAAGA TCAGGTGACG
GCGCGCCGCA TTCTGCTCCG CATGGTGCGT CCAGGCGAGG GGTTGGAGAT CACCAGCAAT
CGCATTCGAC GCGATCAACT CTATCGCGCA GGCGAGGCGC GTGATCGTGT TGATCGGGTG
CTTGAACGCC TGGTTGCTGC ACGCCTGGTG CGGCTTACCC CCGGCGATAC TCCCGGCAGC
GCACAGGTGG AAATCGCCCA TGAAGCGCTT GTGCGCAACT GGCCCACGCT GGTTGGCTGG
CTCGAAGACG AACGCGCGGC CATCGCAACA CGTCGGCGCC TGGAAGCAAA AGCGGCGGAA
TGGGTACGGC TTGGCGGCGG CGCAGCGGGT CTGCTTGACG AGGTGCAACT GGCAGAAGCC
GAACGCTGGT TGAACAGCGC CGAGGCTGCC TACCTGGGAT TCGACGAAGC GCTGCTCGAT
CTGGTGATCG CCAGCCGCAC AGCCATCGAT CAGGCGCGCC ACGCACAGGA GGATCAGCGT
CGTCGCGAAC TCGAACAGGC GCAGGCGCTG GCGGAGGCGC GTCGCCTTCA GGCAGAACAG
AACGAAAAAC TGGCAATCGA GCAGGGAAAG CGCGCCGAAG CCGAGGCGCG CTCGGCGCGT
CGGCTGCGTC TGATTGTGGC GACGCTGACA GTCGCCCTGA TCGGCGCGAT CATGTCGGGC
ATTCTGCTCC TTCAGCAGCA ATCACAGATC CAGGAACGCA CCTTTGAACT GGCGACGCAG
GTAAGTATTT CCGACCAGGC GGCTGCAACC GCTCGAATTG CAGCGGCGAA CGCGCAGGCA
GCCGCTGCAA CCTCGCAGGC TGCCGAAAGC CTGGCGCTGT TGCGTGGCAC CCAGGCGGCG
CTGGCAGCAG CGCAGGAATC TCAGGCGCGC CAGACTGCCG AGGCGCTGGT TCCGGCGCTC
GAACGGCAGG CACGCCAGGC GCGCGCCGGT CAACTCGCGG CACTGGCGCA GGCGAAACGC
GACGAACGAC CGATCCTTAG CCTCCTCCTG GCGATTGAGG CGGTGCATAT CACCCTTCAG
AAAGGCGAAG CGCCGGTTCC GGTGGCTGAC GCAGCGTTGC GCGACTCACT CACGCGCATC
GGCGGCATCG GGCTATTGAT CGGTGAGCCG GTGGTCGCTG CGGCAACCAG CGACGACGGC
AGGGTTGCTG TAGCAATGAC CGCAAATGGA ACCCTCAGCA TCTGGAATCT GACCGATCCT
GGCTTGCCGC CACGGGTCGT CAACACGCCC GGATCACCAA CGCTGCTCGT CCTCTCACGC
GATGGCGCGC GCCTGGCAAC CACTGGCGCC GATCCGACGA GCGTCCGTCT GTGGGATCTT
TCGGGAACAA TGCCGGTCGC ACGCGAACTG GCTGCGCCAG GCGGCATCAA TACTGCGCTC
GCCATCAGCG ACAATGGTCG TCAACTGGCG ATTGGCGATG ATCAGGGCGT TGTCCTTGTG
TACGACCTGA CCAACCCGTC AGCGACGCCG CAGCGCCTCA GCGGTCTCGG CGGGCGCAGC
GCCGTTCGCT CGCTGGCATT CAGCCCCGAT GGTCAACTGC TGGCAACCGG CAACGCGGAT
AGTCAGGCGC GGTTGTACAA TCTGGCGTCC GGCTCTGGAT CGTACACGCG CGAACGCACA
CGCGGCGCAC TGACCTCGAT CACCTTCAGT AACAACGGTC GCTGGATTGT CTATGGCAGC
GCCGATGGAC AGGTGCGCCT CTGGCGCTTA AGCGGAGCAC AGTTTGACTC AGCCTATGTC
CTGCTCGGAT TGACAGCCGA AGTGACCGAC GTGCGCATTG CCCCCGGCGA CAGGCTCATC
ATTGCGGGCA GCGCCGATGG GACGACATGT ATCTGGGATC TTGAAGCGCG GAGCGACAAC
CGCGCCCGTG TGGTGCTGCG CGGTCAAACT GCCAGGATCA CCGGACTGGC ATTGAACGGC
AACGCCAGTC GCCTGGCAAC CGCTGGCGCC GATGGGCGGA TTGCGCTGTG GAACCTGACC
GCAGCCGATC CTGGTGTGAA CCCGCTGATC ATGCGCGGTC ATGATGGCCC GGTGAACGAT
GTGGCGATAC CGGCGCGCAC CTCCCTGATG TTGACGGTCG GCGCCGACGG CATGGCGCGT
GTCTGGAATC TCGATGCGCC GCTGTATGCG CTGAAAACAC TGCCGCAAGA GAGCGTTGAA
CTGCTGGAAG TCGCCTGCCG CGCTGCCGGG CGAACACTGT CGGAATCCGA ATGGAGCGAA
TACGTCGAAG GGCTGCCGTA CAACCCGTTC TGCAAGTAA
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| Protein sequence | MSMTDHPPPE PSRDHEVLAF PSFAALRAAH AEMLRRLHEE GLTTALLSRA AEMIARGSAT
GVILDDEDER TAAQSLLDYW ATILIRKGYE PPDATLDEFD PSLAPELDDS QCPYVGLDPF
REEDAARFFG RRRLVEFLVA RLTEHRMLAL VGPSGSGKSS VVRAGLIPAL KQNAIPGSSA
WRYIPIITPG EQPLFHLAHA WRRLNGQPDD QAQSEELAER FRDPQQVVAA FDGTEAVVLV
VDQMEELFTL TDDESERRAF VAAMVALVEH PSPRHTVITT LRSDFESFIA LEPALQQWME
QARVQLLPLS AGEMREAIER PAELVGLKFE PGVVEALLHD TLGEPAALPL LQFSLLKLWD
ARDRNRVTWQ AYQQIGGGRQ ALARSADALY NSLIPEDQVT ARRILLRMVR PGEGLEITSN
RIRRDQLYRA GEARDRVDRV LERLVAARLV RLTPGDTPGS AQVEIAHEAL VRNWPTLVGW
LEDERAAIAT RRRLEAKAAE WVRLGGGAAG LLDEVQLAEA ERWLNSAEAA YLGFDEALLD
LVIASRTAID QARHAQEDQR RRELEQAQAL AEARRLQAEQ NEKLAIEQGK RAEAEARSAR
RLRLIVATLT VALIGAIMSG ILLLQQQSQI QERTFELATQ VSISDQAAAT ARIAAANAQA
AAATSQAAES LALLRGTQAA LAAAQESQAR QTAEALVPAL ERQARQARAG QLAALAQAKR
DERPILSLLL AIEAVHITLQ KGEAPVPVAD AALRDSLTRI GGIGLLIGEP VVAAATSDDG
RVAVAMTANG TLSIWNLTDP GLPPRVVNTP GSPTLLVLSR DGARLATTGA DPTSVRLWDL
SGTMPVAREL AAPGGINTAL AISDNGRQLA IGDDQGVVLV YDLTNPSATP QRLSGLGGRS
AVRSLAFSPD GQLLATGNAD SQARLYNLAS GSGSYTRERT RGALTSITFS NNGRWIVYGS
ADGQVRLWRL SGAQFDSAYV LLGLTAEVTD VRIAPGDRLI IAGSADGTTC IWDLEARSDN
RARVVLRGQT ARITGLALNG NASRLATAGA DGRIALWNLT AADPGVNPLI MRGHDGPVND
VAIPARTSLM LTVGADGMAR VWNLDAPLYA LKTLPQESVE LLEVACRAAG RTLSESEWSE
YVEGLPYNPF CK
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