| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3857 |
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| Symbol | |
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| ID | 5210839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4819348 |
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| End bp | 4821192 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597452 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001278160 |
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| Protein GI | 148657955 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000427762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000151298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATTGCCG AACTCAAACG TCTGGTCGTT GGCCAGCCGC TCGCCAACGA ACAGTTAGTC
CACGAACGAT TGCCCAAGCG CCTGGCGCTT GCGGTTTTCT CTTCCGATGC GCTCTCATCG
ACGGCATACG CCACCGAAGC GATCCTGATC GTGCTTTCGG CGGCCGGTGC AGCCGCGCTC
TGGCTTGCCA CACCGATTGC GCTCGGCATT GCCGTCCTGC TGATGACGGT CGCATTTTCC
TACATGCAGA CGATCAAAGC GTACCCGCAG GGAGGCGGCA CCTACATCGT CGCGCGTGAG
AACCTGGGAA CGATCCCGTC GCTCACCGCA GCCTCGGCGC TCCTGATCGA CTATATTCTC
ACCGTCGCAG TGAGTATGTC GGCGGGCGTG GCGGCGATTA CATCAGCCTG GCCCATGCTT
GAACCATACC GCGTCGAACT GGCAGTCGGA CTGATCGGAC TGGTCAGCCT GGCAAACCTG
CGCGGCGTCA AGGAATCGGG CGCGATGTTC GCCATTCCGA CATACACCTT CGTTGCCAGC
ATGTTCCTTC TGATTGGCAC AGGGCTGTTC AACATCGTCA CCGGGCATGT GACCCCCGCG
CCGCCGCCAG CGACGCCGCA CCTGGCTGAC GGCGTCGGAG CGCTCTCCCT GTTTCTGATA
CTGCGCGCAT TTGCCGCCGG ATGCACGGCG CTGACCGGCA TTGAAGCCAT TGCCGACGGC
GTCCCTGCCT TCAAAAAACC AGAAGCGCGC AACGCTGCGA TCACCCTTGC AATCATGGCG
GCGCTGCTGA TCGCTATGTT TCTCGGCATC ACCGTGCTGG CGAATGCGTA CCACATCATT
CCCGACGGCA GCAGCGAGCC GGAAACGGCA AACTCGCAAC TGGCGCGCGC AATCTTCGGC
GCCGGCTCTC CGTTCTACTT CCTGCTCCAG ATCGCAACCA TGGCGATCCT GGTGCTGGCG
TCGAACACCG CATTCGCCGA TTTCCCGCGG CTGGCATACT TCCTTGCCCG TGATCGCTAC
TTCCCGCGCC AGTTCACCCA GCGCGGCGAC CGACTGGTCT TCTCCAACGG CATCGTTGTG
CTTGGACTGA TCGCATCGAT CCTGGTAGTC GCATTCCACG CGCGCGAACA GGCTTTGTTG
CCGCTCTACG CCGTCGGCGT GTTTATTTCC TTCACCATCT CACAAACAGG CATGGTGCGC
CGCTGGTGGC GACTCCGGAC GCCAGGCTGG CGCCGCAGCG CGCTGATCAA CGGCGCTGGC
GCCGTGATGA CCGGCATCGT GATGCTGGTG CTGGCAATCA CGAAGTTCCG CGAAGGCGCC
TGGGCAGTGC TGCTGCTGAT CCCGCTGATG GTGACAGTGC TGCTGAACAT TCACCAACAC
TATCAGGCGG TCGCCCGGCA ACTCTCGCTG GCGGACGCGC CCCGTCCATC GCCGGTACGC
CGTCACACCG CGCTGGTGCT CATCAGCGGC GTCCATCGCG GCATGCTTCC GGCGCTCCAG
TACGCGCTGT CGATCGCGCC CGACAATGTG ACGGCGGTGT ATGTCGATCT CGATCCCGAA
AACACCGAAA AAATCAGGCG CAAGTGGAAC GAGTGGGGAT GCGGCATTCC GCTGGTCATT
CTGCCATCGC CGTACCGCTC ACTGATGCAA CCGCTGCTCC AGTACATCGA TGAGGTTGAG
GCGCGCTACG ACGACGATGT GCTGACGATC ATCCTGCCGG AATTCGTACC GTCGAAATGG
TGGCAGTACA TCCTGCACAA TCAAACCGGG CTACAACTCA AAGCTGCGCT CTTCTTCAGC
CGAGGCAAGG TTGTGACCAG CGTGCCCTAC CATCTGGAGC ACTGA
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| Protein sequence | MIAELKRLVV GQPLANEQLV HERLPKRLAL AVFSSDALSS TAYATEAILI VLSAAGAAAL
WLATPIALGI AVLLMTVAFS YMQTIKAYPQ GGGTYIVARE NLGTIPSLTA ASALLIDYIL
TVAVSMSAGV AAITSAWPML EPYRVELAVG LIGLVSLANL RGVKESGAMF AIPTYTFVAS
MFLLIGTGLF NIVTGHVTPA PPPATPHLAD GVGALSLFLI LRAFAAGCTA LTGIEAIADG
VPAFKKPEAR NAAITLAIMA ALLIAMFLGI TVLANAYHII PDGSSEPETA NSQLARAIFG
AGSPFYFLLQ IATMAILVLA SNTAFADFPR LAYFLARDRY FPRQFTQRGD RLVFSNGIVV
LGLIASILVV AFHAREQALL PLYAVGVFIS FTISQTGMVR RWWRLRTPGW RRSALINGAG
AVMTGIVMLV LAITKFREGA WAVLLLIPLM VTVLLNIHQH YQAVARQLSL ADAPRPSPVR
RHTALVLISG VHRGMLPALQ YALSIAPDNV TAVYVDLDPE NTEKIRRKWN EWGCGIPLVI
LPSPYRSLMQ PLLQYIDEVE ARYDDDVLTI ILPEFVPSKW WQYILHNQTG LQLKAALFFS
RGKVVTSVPY HLEH
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