Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3715 |
Symbol | |
ID | 5210694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4650665 |
End bp | 4651903 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640597308 |
Product | hypothetical protein |
Protein accession | YP_001278019 |
Protein GI | 148657814 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00291378 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTATCTG GACGACTCGC AACAGTAGCA TTGTGGCTGC TGATCATTTG CGCTGCGGTT TTTCTGTTCG AGCGCGCAGT AGTTGTCGTT AGTTTTTTTG CTACGCCGCT CCTCCTTTTC GCCCTTGCCT GGCTGATCGC GGTCGTCCTG CAACCGCTGG TGTCACGCCT GACAGCGCTC GATCTCCCAC CGATTACAAT CCGCGCCCGT CGGGTTCCTC CACCACCGCG CCACCTTTCG CGCATGCTCT CGGTGGCGCT GATCTACCTG GCGCTGTTCG CCGCGCTGAT CGTGGTGATC CTGTCGTTCG TACCGGCCAT CACCCAGCAA CTGACCACGC TGACCGGATC GGTGCCGACA ACGGTCGAAT CGATCGCCCG CTGGATCGGG CGACTGGATG AAAGTCTGGA ACGCTTCGGA TTTCGCGGCG ATCTTACCGC AATTGTGCAA CCTGAAGCGA TCGCCCAGCA ACTGACCGGC TTTGGCAGTG CAATGCTCCA GCAGTCGCTT GGTATTGCCG GCAGCATTGC CACCGTCCTG TTCAATATTT TTCTGGTGCT GATCCTCAGT TTCTATATCA CGCTTGACGG TCCGCGCATG GGTAAGAGTT TCGTGGCTGT CCTGCCCCAA TCCTGGCACG ATGAAGTCGA TAACCTTTTT GCCGTGATCG ACCGGGTGTT TGGCGGGTTC ATGCGGGCGC AGTTTGTGAA CTCACTGTTG TACGGGGTTG CAAACGCGAT TGTGATGGCG ATGTTCGGTC TCGGCGATAT TGCGCTTGCC AGTGTCGTCG CTGCCATACT TGTGTTCATT CCACTGGTAG GGGGGTTTTT CGCGCTGATC CCGCCGGCGC TTTTCGCCAT TCTGTTTGCG CCTGATCGGT TGGGATGGCT GTTGCTGACG CTGCTCATCG TTCAGCAGGT GCAGTTCAAT ATTGTCATGC CGCGTCTGGT CGGGCAGGCA ATCGGGTTGC ATCCACTGCT CGTCTTTGCA GCACTGCTTC TCGGTGGAAC AGTCGCCGGG GGCTGGGGCG TTCTGTTTGG CATCCCGGTC GCTGGCGTGA TTGCCTCGAT CACCCAGTTC TTCTATGAAC GCGCCAGGCG CACAGCGATG ATGCTTCCAA CCGACGAGAC ATCTCCATCA GTCCCTCCCG CTGCTCCTGC ATCGGTTGCC GATCCGGTCG CCGGTCATCC CTCGCCCGCC CCGGTTGTCG ATCCGGTCTC CGGTCATCCC CCGTCGTAG
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Protein sequence | MLSGRLATVA LWLLIICAAV FLFERAVVVV SFFATPLLLF ALAWLIAVVL QPLVSRLTAL DLPPITIRAR RVPPPPRHLS RMLSVALIYL ALFAALIVVI LSFVPAITQQ LTTLTGSVPT TVESIARWIG RLDESLERFG FRGDLTAIVQ PEAIAQQLTG FGSAMLQQSL GIAGSIATVL FNIFLVLILS FYITLDGPRM GKSFVAVLPQ SWHDEVDNLF AVIDRVFGGF MRAQFVNSLL YGVANAIVMA MFGLGDIALA SVVAAILVFI PLVGGFFALI PPALFAILFA PDRLGWLLLT LLIVQQVQFN IVMPRLVGQA IGLHPLLVFA ALLLGGTVAG GWGVLFGIPV AGVIASITQF FYERARRTAM MLPTDETSPS VPPAAPASVA DPVAGHPSPA PVVDPVSGHP PS
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