Gene RoseRS_3715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3715 
Symbol 
ID5210694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4650665 
End bp4651903 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content59% 
IMG OID640597308 
Producthypothetical protein 
Protein accessionYP_001278019 
Protein GI148657814 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00291378 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTATCTG GACGACTCGC AACAGTAGCA TTGTGGCTGC TGATCATTTG CGCTGCGGTT 
TTTCTGTTCG AGCGCGCAGT AGTTGTCGTT AGTTTTTTTG CTACGCCGCT CCTCCTTTTC
GCCCTTGCCT GGCTGATCGC GGTCGTCCTG CAACCGCTGG TGTCACGCCT GACAGCGCTC
GATCTCCCAC CGATTACAAT CCGCGCCCGT CGGGTTCCTC CACCACCGCG CCACCTTTCG
CGCATGCTCT CGGTGGCGCT GATCTACCTG GCGCTGTTCG CCGCGCTGAT CGTGGTGATC
CTGTCGTTCG TACCGGCCAT CACCCAGCAA CTGACCACGC TGACCGGATC GGTGCCGACA
ACGGTCGAAT CGATCGCCCG CTGGATCGGG CGACTGGATG AAAGTCTGGA ACGCTTCGGA
TTTCGCGGCG ATCTTACCGC AATTGTGCAA CCTGAAGCGA TCGCCCAGCA ACTGACCGGC
TTTGGCAGTG CAATGCTCCA GCAGTCGCTT GGTATTGCCG GCAGCATTGC CACCGTCCTG
TTCAATATTT TTCTGGTGCT GATCCTCAGT TTCTATATCA CGCTTGACGG TCCGCGCATG
GGTAAGAGTT TCGTGGCTGT CCTGCCCCAA TCCTGGCACG ATGAAGTCGA TAACCTTTTT
GCCGTGATCG ACCGGGTGTT TGGCGGGTTC ATGCGGGCGC AGTTTGTGAA CTCACTGTTG
TACGGGGTTG CAAACGCGAT TGTGATGGCG ATGTTCGGTC TCGGCGATAT TGCGCTTGCC
AGTGTCGTCG CTGCCATACT TGTGTTCATT CCACTGGTAG GGGGGTTTTT CGCGCTGATC
CCGCCGGCGC TTTTCGCCAT TCTGTTTGCG CCTGATCGGT TGGGATGGCT GTTGCTGACG
CTGCTCATCG TTCAGCAGGT GCAGTTCAAT ATTGTCATGC CGCGTCTGGT CGGGCAGGCA
ATCGGGTTGC ATCCACTGCT CGTCTTTGCA GCACTGCTTC TCGGTGGAAC AGTCGCCGGG
GGCTGGGGCG TTCTGTTTGG CATCCCGGTC GCTGGCGTGA TTGCCTCGAT CACCCAGTTC
TTCTATGAAC GCGCCAGGCG CACAGCGATG ATGCTTCCAA CCGACGAGAC ATCTCCATCA
GTCCCTCCCG CTGCTCCTGC ATCGGTTGCC GATCCGGTCG CCGGTCATCC CTCGCCCGCC
CCGGTTGTCG ATCCGGTCTC CGGTCATCCC CCGTCGTAG
 
Protein sequence
MLSGRLATVA LWLLIICAAV FLFERAVVVV SFFATPLLLF ALAWLIAVVL QPLVSRLTAL 
DLPPITIRAR RVPPPPRHLS RMLSVALIYL ALFAALIVVI LSFVPAITQQ LTTLTGSVPT
TVESIARWIG RLDESLERFG FRGDLTAIVQ PEAIAQQLTG FGSAMLQQSL GIAGSIATVL
FNIFLVLILS FYITLDGPRM GKSFVAVLPQ SWHDEVDNLF AVIDRVFGGF MRAQFVNSLL
YGVANAIVMA MFGLGDIALA SVVAAILVFI PLVGGFFALI PPALFAILFA PDRLGWLLLT
LLIVQQVQFN IVMPRLVGQA IGLHPLLVFA ALLLGGTVAG GWGVLFGIPV AGVIASITQF
FYERARRTAM MLPTDETSPS VPPAAPASVA DPVAGHPSPA PVVDPVSGHP PS