Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3713 |
Symbol | |
ID | 5210692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4647346 |
End bp | 4649151 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640597306 |
Product | hypothetical protein |
Protein accession | YP_001278017 |
Protein GI | 148657812 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.80691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0122449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCAGC AAATGAAGAC CGCTATCCCC CGTCTCCTGT CGCTGTTGAC GCTGATCGCC ATCATCGTCG GCATCGTCGT CGCACCCCGC CAGAGTCGCG CCGCAGCGCG CAGCCCGGCT GAAGTCCCCG ACACCTATCC GCCCTATCTC GCCCAGTACT ATCCGCAGAC CGGTCACTCC GCCGTCAATT CGTTCGAGCG CTTCTGGCGG AATACGCCCA ACGCGCTCTT TGTGCTGGGC TATCCGATCT CTCGACCCTT TATTGAGGAA AGTTTCACCA ATCCTGGCGA GTATTACCGC GTCCAGTACT TCGAGCGCGC GATCCTCGAG GAGCATCCGC AAAACTACGG CACGCCCTAC TATATTCTGG GGCGATTGCT GGGAACGCAA CTGGCAAAAG GACGCGAGAA CGAACCGCCG TTCCAGCCGG TTCCCGATCC GCGCGACGGC ACGTGGGATA GTGTGACGCG CCATACGCTG CGCAACTCGC CGGCGCCATT CCGCAGTTTC TGGCTCAACA ATGGCGGGCT GGCGGTCTTC GGTCGCCCGA TCTCCGAACA GTTCCAGGAA GTAAACAAGG CGGACGGCAA AACGTACTGG GTGCAATACT TCGAGCGCCA GCGGATGGAG TGGCACCCTG ACGAGCCTGA CCCGCGCTAC CGCATTCTGC TCGGTCTGCT CGGCAATGAA TACCGCGACG CCAATCATCG CAACAATCCG GCATTCACCC CCGCGCCCCG CGATGATGCA CGCTCGCTGC CGCGCCCGTT CATCTACGGC TACAATGCGC ATCTCTACCA GGATCGCGAA CCCTGGCAGG ATCGCAAGCG CGTGCTGCAA CTGGTCAAGA ACAGCGGCTT CGGTTGGGTG CGTCAGCAGG TGCGCTGGAT GGATCTGCAC GACCGTTCGG GTGCGATCTA CTGGGAAGAA CTCGACGACA TCGTGCGCGA TGCCAATGAG ATGGGCGTGA AACTGTTCAT CAGCGTCGTT GCCGCCCCCA GTTGGGCAAC CGACAATGGA CGCAACGGGT TGCCCAACCG CGCCAACATT GGTCAGTTCG CCTATTTTAT GGGGGAAATG GCAAAACGCT ACCGGGGCAG AGTCGGCGCG TATCAGATCT GGAACGAACA GAACCTGGCG GTCGAAAATG GCGGGCGGGT CGCTTCGGCG GCGCTCTACA TGGACGTGCT GGTCGCCGGT GCGCGGGCGA TCAAGGCGAA TGACCCCTAC GCGATTGTCG TATCGGGTCC GCCAGCAGCC ACTGAAACGA ACAACCCGAA TATCGCCATC AGCGATCTGG CGTTCTTCCG GCAGATGTTC GCCGACCCGC GCTTCCGCGA CGTCGTCGAT GCGATTGGCG TCCACGCTGG CGGCACATCG AACCCGCCCG ACAGCATGTG GCCCGACCGT CCCGGTCCCG GACCGAACTT TGTGACCAGT CGCGAGTTCT ACTTCCGCCG CGTCGAGGAT TACCGGGCGC TGGCGTTACA GTACGGTCTC GGCGACCGAC AGATGTGGAT CACGGAGTTC GGTTGGGCGA CGCGCAACAA TACGCCGGGG TACGAATTCG GCAACCAGAT TTCGTTTGAA CAGCAGGCAG AATGGATCGT GCGGGCGTTC CAGATCGGGC GGCGCGAATA TGCGCCGTGG ATGGGAGCGA TGTTCCTGTG GAACCTGAAC TTTGCCGTGC CGTGGGCGCA GCGCGAAGGC AACCCGCTCC ACGAACAGGC ATCGTTCGGC ATCCTTAATG GCGACTGGAG TCCGCGCCCG GCATACCTTG CCCTGCAACG GATGCCGAAG GATTGA
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Protein sequence | MFQQMKTAIP RLLSLLTLIA IIVGIVVAPR QSRAAARSPA EVPDTYPPYL AQYYPQTGHS AVNSFERFWR NTPNALFVLG YPISRPFIEE SFTNPGEYYR VQYFERAILE EHPQNYGTPY YILGRLLGTQ LAKGRENEPP FQPVPDPRDG TWDSVTRHTL RNSPAPFRSF WLNNGGLAVF GRPISEQFQE VNKADGKTYW VQYFERQRME WHPDEPDPRY RILLGLLGNE YRDANHRNNP AFTPAPRDDA RSLPRPFIYG YNAHLYQDRE PWQDRKRVLQ LVKNSGFGWV RQQVRWMDLH DRSGAIYWEE LDDIVRDANE MGVKLFISVV AAPSWATDNG RNGLPNRANI GQFAYFMGEM AKRYRGRVGA YQIWNEQNLA VENGGRVASA ALYMDVLVAG ARAIKANDPY AIVVSGPPAA TETNNPNIAI SDLAFFRQMF ADPRFRDVVD AIGVHAGGTS NPPDSMWPDR PGPGPNFVTS REFYFRRVED YRALALQYGL GDRQMWITEF GWATRNNTPG YEFGNQISFE QQAEWIVRAF QIGRREYAPW MGAMFLWNLN FAVPWAQREG NPLHEQASFG ILNGDWSPRP AYLALQRMPK D
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