| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3582 |
|---|
| Symbol | |
|---|
| ID | 5210560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4479288 |
|---|
| End bp | 4480424 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640597176 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001277888 |
|---|
| Protein GI | 148657683 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTATG AGCGCCCGGA ATATATGAGC ATCTCACGAG ATCCGCGAGA GGATGGTTCA
CCGATGATCA ACGAACGAAT CGGCGATGCA GGCGCCGAGC ATCCTGCTGT GTTGCCGGAA
ACGCCGGAGA TTCAGGAAGT CGAGCGCCAG GGGTTCTCTC TGGCGAAGGC GTTGCGCAGC
CCGCGCACGC TGATTTCATT TGCGCTTGCG ATTGCCATTG TTGTCTTTGC GGTGCGCGGC
TTTGACATCG ATGTGCAACA GACCTGGCAG TACATCCGCG GCGCGAATGG ATGGCTGCTC
CTGGCTGGCT TCGGTATCTT TTATCTGACG TTTCCACTTC GCGCGCTGCG CTGGCGCATG
TTGCTGGAAA ATGCACATGT GCCGGTGAAT GAGGGACGGA AGAGTTGGGC GTCACTGCCG
GCGCTGATGG AATATATCTA CCTCTCGTGG TTTGCCAACT GCGTGGTGCC TGCCAAACTT
GGCGACGCCT ACCGCGGCTA TCTGCTCAAG CAGAATGGAC GGGTGTCCTT CTCTGCGACA
TTCGGCACCA TTTTCGCCGA GCGTCTGCTG GATATGCTGG GTCTGTTCGG CTTGCTGGTG
CTGTCGGCGT GGTTCACGTT CGGCGCACAG ATGCCGGAAA GCACGCGCAT TGTCTTCGGG
TTCGGCGCGC TGCTCGTGGT GGCGATCGTC AGCGGTCTGG CTGGCATGCG CTGGTTGAGT
CCGGTCATCC GGCGATTCAT TCCCAAACGC CTGATCGGGG TCTACGGCAA CTTTGAGCAT
GCCGCGCTGC GCTCATTCCG TCCGGGCATT CTGCCGCGGT TGATTGTGCT GACCTCCGCT
GTCTGGCTGC TGGAAGGGAT GCGACTCTAT TTCGTGATTC AGGCGCTCAG CCACGAGGGG
CTGGCGTTGC CGTTGTCGGC GATCATCTTC GTCGCGCTGG CATCGTCGCT GTTGACCGCC
ATTCCATTTA CTCCGGCTGG TCTGGGCGTG GTCGAAACGG TGATCACCGG CGTGCTGACG
TTCTTCAAGG TTGGGACGAG TCTGGGCGGT GCGGTGACCA TCCTCGACCG GGTCATCAAT
TTCTGGAGTA TTGTGGTGAT CGGGTTTGTC CTGTACGTGG TCAGCAAGCG TCGGTAA
|
|---|
| Protein sequence | MAYERPEYMS ISRDPREDGS PMINERIGDA GAEHPAVLPE TPEIQEVERQ GFSLAKALRS
PRTLISFALA IAIVVFAVRG FDIDVQQTWQ YIRGANGWLL LAGFGIFYLT FPLRALRWRM
LLENAHVPVN EGRKSWASLP ALMEYIYLSW FANCVVPAKL GDAYRGYLLK QNGRVSFSAT
FGTIFAERLL DMLGLFGLLV LSAWFTFGAQ MPESTRIVFG FGALLVVAIV SGLAGMRWLS
PVIRRFIPKR LIGVYGNFEH AALRSFRPGI LPRLIVLTSA VWLLEGMRLY FVIQALSHEG
LALPLSAIIF VALASSLLTA IPFTPAGLGV VETVITGVLT FFKVGTSLGG AVTILDRVIN
FWSIVVIGFV LYVVSKRR
|
|---|
| |