Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3511 |
Symbol | |
ID | 5210488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4400888 |
End bp | 4401982 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597106 |
Product | beta-lactamase |
Protein accession | YP_001277819 |
Protein GI | 148657614 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.700919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTG ATCCAGAACG TCTGCAACGC GCCTTTCGAA TCCTCCAGGG GTGGCTTGAT GAGGGAACAG TGACCGCCGT GGCGTCGGTT GTTCTGCACC ATGGTCGGGT GGCAGGTGAG TTTTATGGCG GGGTTGTTTC ACCGGCGCCA GAGGCGCCAG CGGTCAACGG CAGCAGCCTG TTCCATATTG CATCGATTGG GAAACCGATG ACGGCGCTCG CGGTGATGCT CCTGGTCGAA TCCGGTTGCA TCGCACTCGA CGATCCGGTT GGCGATATCT TGCCCGGATT CCGGGGCGCG GGGCGCGACG CCATCAGTGT GCGTCAGTTA CTGACCCATA CGTCCGGTTT GCCGCAAGAC CCCGATCTCA GTCAGTTGCC GCCCGATGTC AGCACATTCG ACGAACTGCG CACGTATATC CACGCGCTGC CAGTGGTTCC GCCTGGTAGC AAAGTGGAGT ACAGCAATGT GGGGTATGGT CTGCTCGGTT TGATTATTGA AACGGTCAGC CAGCAACCAT GTGCCACATT CATGCGTGAG CATGTCTTCG CGCCGTCCGG TCTGGACGAC ACCTGGCTTG CGCCGCCGGA TCATCTTTTC CCCCGTATCG TGCGTGTGGA TGGAACGTTT GATCGCGGCA GTTCAACCGA ACGTTTCAAT TCCACGTATG CGCGGCGGCG GACGCATCCG GCGGGGAGTG TCATCGCTAC GGCGCGTGAT GTTGCGCGCT TCTTCCAGAT GTTTCTCGAC AACGGCGTCG TTGAAGGACG ACAAGTTATT TCCCCCGCCA CTGCGCGCCT GATGATTACC AATCATACCG CCGGACTGCG GGGCGGTATC GAGGGCTTCA TGACGTGGGA CGACTGCGCC TGGGGGTTGG GGTTTGATCT ACGCGGTAAC AAACGCCCCC ACTTCTCCGG CGAATATACC TCGCCGCACA CCTTTGGTCA CACCGGAGTG TCCGGCGTCT TTGCCTGGGC GGATCCGGAA ATCGATCTGG TGTGCGTGAT GCTGGCGAAC CGCACCCTCT TCGACGCCTG GAACACCTCG CGCTGGTCGC GCTTCTCGAC GGCGGTTGTC GCCTCGCTCC GCTGA
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Protein sequence | MTIDPERLQR AFRILQGWLD EGTVTAVASV VLHHGRVAGE FYGGVVSPAP EAPAVNGSSL FHIASIGKPM TALAVMLLVE SGCIALDDPV GDILPGFRGA GRDAISVRQL LTHTSGLPQD PDLSQLPPDV STFDELRTYI HALPVVPPGS KVEYSNVGYG LLGLIIETVS QQPCATFMRE HVFAPSGLDD TWLAPPDHLF PRIVRVDGTF DRGSSTERFN STYARRRTHP AGSVIATARD VARFFQMFLD NGVVEGRQVI SPATARLMIT NHTAGLRGGI EGFMTWDDCA WGLGFDLRGN KRPHFSGEYT SPHTFGHTGV SGVFAWADPE IDLVCVMLAN RTLFDAWNTS RWSRFSTAVV ASLR
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