Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3453 |
Symbol | |
ID | 5210430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4333589 |
End bp | 4334242 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640597048 |
Product | hypothetical protein |
Protein accession | YP_001277761 |
Protein GI | 148657556 |
COG category | [S] Function unknown |
COG ID | [COG3828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0318232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTCGG CTCTATTCGT CTGGGGAGGA TGGGAAGGTC ACGAGCCAAA GCAGTGCGTC GATATATTTG CGCCACTGCT GCGCGCCGAG GGGTACGAGA TCACGATCAG CGATACGCTC GATTCGTACC TCGACCGCGA ACGTATGCAC TCCTATAGTC TTATCGTTCA GGTCTACACG ATGGCGACGA TCACGCGCGA GCAAGAACAA GGGCTTCTGG AGGCGATCGC AAGCGGGGTC GGGTTCGCCG GATGGCACGG CGGTATGGCT GACGCATTCC GCCAGAGCAC CGACTATCAG TTCATGGTCG GCGGTCAGTG GGTCGCGCAT CCCGGTAATA TCATCGACTA TACGGTGAAT ATCACCAACC ACGATCACCC TATCACCGCC GGATTGAACG ACTTTCGCAT GCACTCCGAG CAGTACTACA TGCACGTCGA TCCGGGCAAC CATGTGCTGG CGACGACAAC GTTCAGCGGC GAGTACTGCC CGTGGATCGA AGGCGTGGTC ATGCCGGTGG TCTGGACGAA AATGTGGGGG AAAGGTCGCG TCTCGTACTG CTCACTCGGC CACGTGGCGC GCGATTTCGA CGTACCCGAA GCGCGCGAAC TGGTGCGGCG CGGTATGCTC TGGGCAAGTC GGGTTGAAGG TTGA
|
Protein sequence | MKSALFVWGG WEGHEPKQCV DIFAPLLRAE GYEITISDTL DSYLDRERMH SYSLIVQVYT MATITREQEQ GLLEAIASGV GFAGWHGGMA DAFRQSTDYQ FMVGGQWVAH PGNIIDYTVN ITNHDHPITA GLNDFRMHSE QYYMHVDPGN HVLATTTFSG EYCPWIEGVV MPVVWTKMWG KGRVSYCSLG HVARDFDVPE ARELVRRGML WASRVEG
|
| |