Gene RoseRS_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3453 
Symbol 
ID5210430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4333589 
End bp4334242 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content59% 
IMG OID640597048 
Producthypothetical protein 
Protein accessionYP_001277761 
Protein GI148657556 
COG category[S] Function unknown 
COG ID[COG3828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0318232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGG CTCTATTCGT CTGGGGAGGA TGGGAAGGTC ACGAGCCAAA GCAGTGCGTC 
GATATATTTG CGCCACTGCT GCGCGCCGAG GGGTACGAGA TCACGATCAG CGATACGCTC
GATTCGTACC TCGACCGCGA ACGTATGCAC TCCTATAGTC TTATCGTTCA GGTCTACACG
ATGGCGACGA TCACGCGCGA GCAAGAACAA GGGCTTCTGG AGGCGATCGC AAGCGGGGTC
GGGTTCGCCG GATGGCACGG CGGTATGGCT GACGCATTCC GCCAGAGCAC CGACTATCAG
TTCATGGTCG GCGGTCAGTG GGTCGCGCAT CCCGGTAATA TCATCGACTA TACGGTGAAT
ATCACCAACC ACGATCACCC TATCACCGCC GGATTGAACG ACTTTCGCAT GCACTCCGAG
CAGTACTACA TGCACGTCGA TCCGGGCAAC CATGTGCTGG CGACGACAAC GTTCAGCGGC
GAGTACTGCC CGTGGATCGA AGGCGTGGTC ATGCCGGTGG TCTGGACGAA AATGTGGGGG
AAAGGTCGCG TCTCGTACTG CTCACTCGGC CACGTGGCGC GCGATTTCGA CGTACCCGAA
GCGCGCGAAC TGGTGCGGCG CGGTATGCTC TGGGCAAGTC GGGTTGAAGG TTGA
 
Protein sequence
MKSALFVWGG WEGHEPKQCV DIFAPLLRAE GYEITISDTL DSYLDRERMH SYSLIVQVYT 
MATITREQEQ GLLEAIASGV GFAGWHGGMA DAFRQSTDYQ FMVGGQWVAH PGNIIDYTVN
ITNHDHPITA GLNDFRMHSE QYYMHVDPGN HVLATTTFSG EYCPWIEGVV MPVVWTKMWG
KGRVSYCSLG HVARDFDVPE ARELVRRGML WASRVEG