Gene RoseRS_3434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3434 
Symbol 
ID5210411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4307410 
End bp4308381 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content61% 
IMG OID640597029 
Productpyridoxal 4-dehydrogenase 
Protein accessionYP_001277742 
Protein GI148657537 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0581734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACG CATCACACTC CCTGCCGCTC CGCCCGCTCG GTCAAACTGG TTTCCAGGTA 
ACGCCGATCT GCATCGGGTG CGCACCACTC GGAAATATGC CCGAAACCTT TGCCTACAGT
GTTGCCGAAG ATCAGGCGAT TGCAACCCTG ACCGAAGCGT TCCGCAGTCC GATCAATTTC
CTGGACACCG CTGCGGCATA CGGCGATGGT GAAAGCGAAC GCCGGATCGG GGTCGTATTG
CGCAACCTGG GTGGTCTTCC GCCTGGATTC GTGCTGGCGA CCAAAGCCGA CCGCGATCTG
ACGACTGGCG ATTTCAGCGG CGACCAGATC CGGCGCTCGG TCGAGCGCAG CCTGGCATTA
CTGGGACTCG ACCGCCTGCA ATTCGTGTAC ATCCACGACC CGGAGCACAC GACGTTCGAG
AATGTGATGG GGAAAGGCGG TCCACTTGAG GTCTTGCAGC GTTTCCAGGC AGAAGGGGTG
ATCGAACACA TCGGCATTTC CGGTGGTCCG ATTCCTATGC TCATCCGTTA CGTCGAAACC
GGTGCATTTA TGGCGGTTGA GACGCACAAT CGCTACACGT TGCTGAACCG GTCGGCGGAA
CCACTGCTCG ATGTTGCATC CAGGCGCGGA GTGGCCGTGG TCAATGCAGC GCCGTATGGC
AGCGGCATCC TGGCGAAGGG ACCGGACGCC TATGCGCGCT ATGCGTACCA GGATGCGCCG
CCGGCGCTGG TTGAACGAAC GCGCGCCCTG GCAGCGATCT GCCAGGAGTA CGGCGTGCCG
TTGGCGGCTG CCGCGCTCCA GTTCTCACTG CGCGATCCAC GCATTACATC AACCGTTGTG
GGCGTCAGCA AGCCGGAGCG AATTGCAGCT ACCCTGGAAC TGGCGCGCAT CCCCATCCCC
GACGAACTCT GGCAGCGCCT CGATGCAGTG GGGTTCGATA CGAACGACCC GGAAGAGCAT
CGGTTCACGT AA
 
Protein sequence
MTHASHSLPL RPLGQTGFQV TPICIGCAPL GNMPETFAYS VAEDQAIATL TEAFRSPINF 
LDTAAAYGDG ESERRIGVVL RNLGGLPPGF VLATKADRDL TTGDFSGDQI RRSVERSLAL
LGLDRLQFVY IHDPEHTTFE NVMGKGGPLE VLQRFQAEGV IEHIGISGGP IPMLIRYVET
GAFMAVETHN RYTLLNRSAE PLLDVASRRG VAVVNAAPYG SGILAKGPDA YARYAYQDAP
PALVERTRAL AAICQEYGVP LAAAALQFSL RDPRITSTVV GVSKPERIAA TLELARIPIP
DELWQRLDAV GFDTNDPEEH RFT