Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3341 |
Symbol | |
ID | 5210318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4190627 |
End bp | 4192081 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596939 |
Product | fumarate lyase |
Protein accession | YP_001277652 |
Protein GI | 148657447 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1027] Aspartate ammonia-lyase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.611164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAG CATTCCGCAT CGAGAAGGAC TCGCTCGGCG AAGTGAGGGT GCCAGCGAAC GCACTCTATG GAGCACAAAC GCAACGCGCC GTGATGAACT TTCCGGTCAG TGGCATGCGT CCATACCCGG CATTCGTCTG GGCGCAGGCG ATGATCAAGC GCGCTGCGGC GGAAGTCAAC CGCGACCTGG GACTGTTCAA CGACGTCACG ATTGGCGACC GCACCATCAG CGGGCGACAG ATCGCCGATG CGATCATCCA GGCGGCGGAC GAAGTGCTCG ATGGGCAGCA TGCCGACCAA TTCGTCGTTG ACCCCTTCCA GGCTGGCGCA GGCACCAGCC ATAACATGAA CCTTAACGAG GTGATTGCCA ATCGCGCGAA CCAGATCCTG GGCTTTGCGC TCGACGATCC GAAGAAGCCG GTCAGCCCGA ACGACCACGT CAACATGGCG CAGAGCACCA ACGACACTAT TCCAACCGCT ATCCGCCTTG GCTGCCTCTG GCGTCTCGAC GAACTGCTTG CCGCTATTGA TCGGCTTGCT GATGCGCTCG AAGCCAAGGC GCAGGAGTTC GATCCGATCG TCAAATCGGG ACGTACCCAC TTGCAGGATG CCGTACCGGT GCGATTGGGG CAGGAGTTTG GCGCGTATGC GCTGGCGGTG CGCAATGATC GTGAGCGGAT CGAGAGCGCT GCCGACCGGT TGCGCCGGTT GGGTATTGGC GGCACAGCCG TGGGTAGTGG GTTGAATGCG CATCCCGAAT ACCACGGGCG AATGGTCAAA CGCCTGTCGG AGTTGACCGG TCAGGAACTG CGCTCGGCGG GCAATCTGTT CGAGGCGATG CAGAGTATGG CGGATCCGGC GGATTTCTCA GCGTCATTGC GCACGCTGTG CATTACGCTG ACCCGTATCG CCAATGATCT CCGTCTGCTT GCATCAGGAC CAACGACCGG TCTGGATGAG ATCCGACTGC CGGCGGTTCA ACCCGGTTCG AGCATTATGC CCGGTAAAGT CAATCCGGTA CTGGCGGAAA TGCTGAACAT GGCGTGCTTC CATGTGCAGG GATGCGATCT GACCGTTTCG CTTGCGGCGC AAGCCGGGCA ACTCGAATTG AATGTGATGA TGCCGATCAT CGCCCACAAC CTGTTCGAGA TGATGCACGT CCTCATTGGC GCTATCAATG CCTTCACCGA GAAGTGCGTG GTTGGCATTA CCGCCAACCC CGAAAAGGCG ACCGGATGGC TGGCAAAGAA TCCGATCCTG GTGACGGCGT TGAATCCGGT GATCGGATAC CTCAACGGCG CTGCAGTCGC CAAAGAAGCG CTGGCAAGCG GCAAGACGAT CAAGGAGGTG GTGGTCGAGA AGGGTCTCCT CTCACCGGAA CAGGTCGATG AACTGCTCGA TGTACGCGCC ATGACCGAAG GCGGCATTAT GGGCATCGGC GGCGGCGGCG GGTAA
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Protein sequence | MSEAFRIEKD SLGEVRVPAN ALYGAQTQRA VMNFPVSGMR PYPAFVWAQA MIKRAAAEVN RDLGLFNDVT IGDRTISGRQ IADAIIQAAD EVLDGQHADQ FVVDPFQAGA GTSHNMNLNE VIANRANQIL GFALDDPKKP VSPNDHVNMA QSTNDTIPTA IRLGCLWRLD ELLAAIDRLA DALEAKAQEF DPIVKSGRTH LQDAVPVRLG QEFGAYALAV RNDRERIESA ADRLRRLGIG GTAVGSGLNA HPEYHGRMVK RLSELTGQEL RSAGNLFEAM QSMADPADFS ASLRTLCITL TRIANDLRLL ASGPTTGLDE IRLPAVQPGS SIMPGKVNPV LAEMLNMACF HVQGCDLTVS LAAQAGQLEL NVMMPIIAHN LFEMMHVLIG AINAFTEKCV VGITANPEKA TGWLAKNPIL VTALNPVIGY LNGAAVAKEA LASGKTIKEV VVEKGLLSPE QVDELLDVRA MTEGGIMGIG GGGG
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