| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3278 |
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| Symbol | |
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| ID | 5210253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4130091 |
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| End bp | 4130735 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596874 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001277589 |
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| Protein GI | 148657384 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.749326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TCAATCGTCC GATTCGAGTC GTCCTTGCTG ACGACCACGA ACTGGTGCTC
GAAGGATTGC GCGGTCTGCT GGAACGTGAA AATGATATGA CGGTGGTCGC CACTGCAACC
GATGGCGAGT CGCTCCTCGC ACTCATCGAG AGCGAACGAC CGGATGTGGT GGTGATGGAT
CTGGCGATGC CCACCCGTGA TGGACTGTCA TGCCTGCGCG AGATCCGTCG GCGCGGCATG
CCGGTCAAGA TTGTGATTCT GACCGCCTTT GGCGATGGAG GAGCATTGCA GTCGGCGTGG
GAGTTGCAGG CGGATGGGTT TGCGCTGAAG ACCGATCCGC CTCGCCAGAC GATTGCGACG
ATCCGCAACG TGGCGCATGG GCAGATTGTG TTTCCGCGCG TGGTGCGCCA GGCTGCCGAT
CCATCGCAGA CGCAGCATAC CAGTCTGCTC GCGCGTCTCA CTCAGCGCGA GCGCGATGTG
TTGCGCCTGC TCGCAGAAGG CATGCCAAAC GCCCAGATCG CCGAACGACT GGTGGTGCAG
GAGAGCACGG TGAAATATCA TTTGCAGAAT ATCTTCCAGA AACTGGGGGT TACCAATCGC
ACGGAGGCGG CGCAGGTGTA CTACCGCGAA GGCGGGGAAC GTTGA
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| Protein sequence | MTDLNRPIRV VLADDHELVL EGLRGLLERE NDMTVVATAT DGESLLALIE SERPDVVVMD
LAMPTRDGLS CLREIRRRGM PVKIVILTAF GDGGALQSAW ELQADGFALK TDPPRQTIAT
IRNVAHGQIV FPRVVRQAAD PSQTQHTSLL ARLTQRERDV LRLLAEGMPN AQIAERLVVQ
ESTVKYHLQN IFQKLGVTNR TEAAQVYYRE GGER
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