Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3176 |
Symbol | |
ID | 5210147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3999093 |
End bp | 4000025 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596768 |
Product | auxin efflux carrier |
Protein accession | YP_001277487 |
Protein GI | 148657282 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTGCA TGTTCATCGT TTCGGCTTTC ATTGAAGTCC TCCTCCCGGT GACGGTGGTC GTGGTGTGCG GATATGCGCT GCGACGCCGC TTCGAACTGG ATCTCCCATC ACTCAATCGC TTAAGCATGT ATGTTCTTGG TCCTGCATTG ATCTTCACCA CGATTGTGCG GATCGATGTG ACCGGCGACG AGGCAGCGCG CATCATTGCC GCGTCTGTGG CACTGTGTCT GGGAATCGGG GTCGTTGGGC TGATTGTCGG TGCGCTTATG CGCCTGGATC GCAGCAGCCT GATGGCATTG CTTCTCTGCG TGATGTTCAT GAACTCGGGC AACTACGGTT TGCCGACAAC ACGCTTTGCG TTCGGTGAAG CCGGTTTTCA GCGCGCACTC CTCTACTTCA TAGCGCAGAC AATCCTGGCG CAGACGCTGG CAGTACCGAT CGCCAGCGCC GGACGCGGCG ATCTCAAAAG CGCAGTGCGG CAGATGTTCG CCATGCCGCA GATCTATGCG GTCGCAGCGG GTTTGCTGGC GCGCTTCAGC GGCATCGATC TGCCGCATCG CGGTGATGCA CTGGGCAGTG CGTTTCGCGG CGTGGCGCTG ATGGCTGATG CCGCATTGCC GCTCCTGCTG CTTTTGCTGG GCATGCAACT GGCAAATGGA ACCACGGTGG AAGACGTTCG GTTGACCATG GTGGTTGCCG GGTTGCGGTT GGGGGTTTCA CCGCTTATGG CGTATGGTCT GGCGCGCGCG CTGGCGCTCG ATGACCTGGC GCTGCGGGTG GTGGTGCTCG AAGCCAGTAT GCCCACAGCC GTCAATATGG TGCTCTACTC GCTCGAATTC AACGCCCGTC CGCGATTCGT CGCAGGGGTA GTGGTTGTCA CGACGCTGAT GAGCCTGGTG ACTCTAACGC TGCTCCTGAG CGTATTGCGG TAG
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Protein sequence | MGCMFIVSAF IEVLLPVTVV VVCGYALRRR FELDLPSLNR LSMYVLGPAL IFTTIVRIDV TGDEAARIIA ASVALCLGIG VVGLIVGALM RLDRSSLMAL LLCVMFMNSG NYGLPTTRFA FGEAGFQRAL LYFIAQTILA QTLAVPIASA GRGDLKSAVR QMFAMPQIYA VAAGLLARFS GIDLPHRGDA LGSAFRGVAL MADAALPLLL LLLGMQLANG TTVEDVRLTM VVAGLRLGVS PLMAYGLARA LALDDLALRV VVLEASMPTA VNMVLYSLEF NARPRFVAGV VVVTTLMSLV TLTLLLSVLR
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