| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3148 |
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| Symbol | |
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| ID | 5210118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3959959 |
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| End bp | 3962172 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640596739 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001277459 |
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| Protein GI | 148657254 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGACAGT TTCGTCGCAT ACCGGTTCAA CGTCTCGATT GGACGCTCGT CGTTCTTGTG
ATCCTGGCAG TTCTGGCGCC TGGATTTGCC GCCATCGATG CAACGCTGCC ACTCTCGTCG
GGTGCGTTCT TCTGGGGCGG CATCGCAGGA TCAGGACTGG GTGCAATTGT CGGGTATCGC
GCTACGTCTT GCGCTTCGCG TCGGGCGCTG CGCATTGCAG CGTTGACCCT GATCTGGTTC
ATTGGTCTTG CCCTTCTGCT GCTCAGCATT GGTCAGGCAT TGCCAGCGCT CGACGTCGCC
GCTGCCGACA TATGTGCTGC AATCTCGTGG GCATGGAAGG TAGCATGGCG CGATCCAGCC
GCCGGTGAAC CGCCGCAAAC GCTGACACTG GCGCTCTGGC GTGTTGCCCT GTTCCGCTTC
CGCGACCAGC TCATCGCTGC GCCGGCTGGC GGAGAACGCG GTGCTGCGCT CATGCTGTCG
GTCGCCGGCG CGACCCTTAC CTGGAGTGGT GCGTTTCTTA CCGGCATCGC CATCCGCACC
CGCCGAACGA CGTTGACATA TGGTTTGCCC TTGCTCATTG CGCTTGGGAT CGTGGCGATT
CCCGGCGGCG GCAGCGGCAG CCCGTTGATT ATCGGCTCTG GCGTCTGGCT TGTGCTTGCC
GTTGCCAGTG ATTTTCGACG GCGTGAGACG ATGTGGGATG CTGCCGCCAT CGACTACTCA
ACCGAACTGT TCCGCGATAT GGTGATCTGG GGCGGGTTGC TGACTGCCGG TGCGCTGTTT
GTCGCATGGG CGCTGCCGCT CTGGCCCGGC AACCCGCTGG CGCGCATCTT CGTCCGTGAC
GACGCGATTC CTTCCGGTCT GGCGGTGCTG GAGCGTTCGA TTCGGCGCCC TCTGCCATCG
GGCGGAGTTG CAGACATTGG CGTACCGGTT TTTGCCGAAC TTCCGCTTGG TCTCTCGCTC
GAGCAGGGTC CGCCGGATCA ACTGGCGCTG CGCGTGACGT TGAGTGCGCC GCTGCCGCCT
GCGCGTGAGC CGCGCTACTG GCGTGCGCGA ATCTTCAACC GCTACACCGG CGATGGGTGG
GGCAGCAGCG CGCGCGTCGC CGATGAACCG CCGGTTGCCT TTCCGAATGA ACCTCTGCCT
GGAACGATCA TGCAGTACGT CGAAGACCTG CGGCCACAAC GTGCCACGCT GGTTGCGCTC
CCCGACCCGC TGTTCGCCGA CATACCAGCC CGCGCCGAAC GATTGCGTGA TGGATCGCTG
ATGGCGCTCG TTCCGGTCGG CAGCGGTGCG CGCTACCGAG TCCTGTCGCG GTTGCCTGAA
CAGGCGCCAC CCCCGGAGAG ACGCCAGCCG GGGGGCGAGG CAGTCGATCT CGGACCGTAT
CTGGCGCTCC CCACGAGCCT GCCGATGCGG GTGCGCGACC TTGCCGTCGT CATTGCAGGC
GATAGACAGG GGGACGAAGC GCGCGCACAG GCGCTGGAGC GCTACCTGCG CAATCTCCCC
TACGCCTACG AAGTCGAGCC GCTTGCTGAC GGCGTTGATG GCGTCGATCA CTTTCTCTTC
TCGATGCGCA GCGGCTACTG CACCTACTAC GCCTCCGCAA TGGCAGTGAT GGCGCGTGCG
CTGGGCATCC CCTCGCGTCT TGCGGTCGGA TATGCGTCGG GCGAATATGA CGAACGTGCT
GGCAGTTACC TGGTGCGCGA AGCCGACGCG CACGCCTGGC CCGAACTCTT CATCGCCGGG
CGGTGGGTGG CGTTCGAACC AACGCCGGTT CGTCCGCTTC CGGATCGCGG CGCCATTGCA
CCCTCACCAG CTCCGGTTGC AACGCCGGTC GAAGCTGCAC CTCCTGATCG GATAAGAGGT
GTGCTCATCT GGCTTGCCGT CCTGAGCGGT GTGGCCGCCC TGACCGCTGG CGGATTCCTC
CTCGGTCGGC GTCCACCGCG CGACACGCCG ATCGCGCGCG CGCAGCGCGA CCTGGAGCGG
TGCGGCGCCC GTGCAGGTGT CGAGTGGTCT CCAGGCGCGA CGATCCACGA ATACGCAACG
CTGGTCGCGC TGCGCGCGCC GGAGATCGCT GCCGACCTGA TGACGCTGGC GGCGATCCTG
ACCGAAGCCC GTTACAGCAA CCATCGTCTG GACTCTGCGG CGCTGGCGCA GATTGAGCGG
GCACTGACGC GACTGCGATC CTGGCGTCCA ACGCGCAGGT CGATTCGGTC ATGA
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| Protein sequence | MGQFRRIPVQ RLDWTLVVLV ILAVLAPGFA AIDATLPLSS GAFFWGGIAG SGLGAIVGYR
ATSCASRRAL RIAALTLIWF IGLALLLLSI GQALPALDVA AADICAAISW AWKVAWRDPA
AGEPPQTLTL ALWRVALFRF RDQLIAAPAG GERGAALMLS VAGATLTWSG AFLTGIAIRT
RRTTLTYGLP LLIALGIVAI PGGGSGSPLI IGSGVWLVLA VASDFRRRET MWDAAAIDYS
TELFRDMVIW GGLLTAGALF VAWALPLWPG NPLARIFVRD DAIPSGLAVL ERSIRRPLPS
GGVADIGVPV FAELPLGLSL EQGPPDQLAL RVTLSAPLPP AREPRYWRAR IFNRYTGDGW
GSSARVADEP PVAFPNEPLP GTIMQYVEDL RPQRATLVAL PDPLFADIPA RAERLRDGSL
MALVPVGSGA RYRVLSRLPE QAPPPERRQP GGEAVDLGPY LALPTSLPMR VRDLAVVIAG
DRQGDEARAQ ALERYLRNLP YAYEVEPLAD GVDGVDHFLF SMRSGYCTYY ASAMAVMARA
LGIPSRLAVG YASGEYDERA GSYLVREADA HAWPELFIAG RWVAFEPTPV RPLPDRGAIA
PSPAPVATPV EAAPPDRIRG VLIWLAVLSG VAALTAGGFL LGRRPPRDTP IARAQRDLER
CGARAGVEWS PGATIHEYAT LVALRAPEIA ADLMTLAAIL TEARYSNHRL DSAALAQIER
ALTRLRSWRP TRRSIRS
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