| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3050 |
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| Symbol | |
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| ID | 5210018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3828692 |
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| End bp | 3830965 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640596642 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001277364 |
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| Protein GI | 148657159 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0190244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.13375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTCC GAAACAGATG TTCACCACGT TCCTCACACT CTGACATCAG CTACGAGGAG
GTACCTGTGT CTAGAACACG CACACTGAGC CGACGACGAT TCCTGACGCT TTCGGCGATG
ACTGCTGCCA GTGCGGCGAT TGCTGCGTGT GGCGGCGGTC AGCCTGCTCA GGCGCCAACG
TCTGCACCGG CGCCGACATC TGCACCGGCG CCGACATCTG CTCCCGCGCC AACTGTTGCC
ATCCCGCCCA CCACGCCGCC CCAGGCGACT GCTGTGCCCC AGGCGGTCAG CAGGTTCAAA
GAGTCGCCCG AACTGGCAAA ACTGGTCGCC GAAGGGAAAC TGCCGCCCGT TGATCAGCGT
CTGCCGAAGA ACCCTTACGT TGTGCCGCAC AAATGGCTCA GTGTCGGCAC GTATGGCGGG
ACGCTCAACT TCACCAACTC GTGGGGACCC GATGGTATGG CGACGATTGT GCAGGAGAGC
CAGTACGGTC ACTCGATCCT GCGCTGGCTT GACGATGGCT TGAAGATTGG TCCGGGGCTT
GCTGAAAGTT GGGAAGCGAA TGCCGATGCC AGCGAGTGGA CGTTCAAGTT CCGCGAGGGG
CTCAAGTGGT CTGACGGGCA TCCCTGGACG GTCGATGACA TTCTGTACTG GTGGGAGTAT
ATGGTCGGCG GCAACGGGAA GGAGAAAGAG TTTCCGGAGG GGTTGAAGCC GATCGAGCCG
CCGCCGGACG AGGGACGTTC CGGTACTGGA ACGCTGGCGA CTCTCATCAA AGTCGATGAC
TACACGCTGA CGATGAAGTT CGATGCGCCA GCGCCGCTGA CTGCTGATCG CCTGGCGATG
TGGGTCAACG CAGGCATCGG ACCGCGCTGG ATGGCGCCGC GGCATCATAT GGAGCAGTTC
AACCCGGTGC TCAACCCTGC AAAATACAAA GACTGGGACG AACATACCAA GCGCATCCGC
TTCGTCACCA ACCCCGATTG CCCGACGATG ACGGGATGGA AGTGTGAAAG TTTTGAGGAG
GGCGTGCGTG GCGTTTATAC CCGCAACCCG TATTACTGGT GTGTCGACGC TGAGGGGAAT
CAACTGCCAT ACATCGACCG CATCGTTTCG ACCACCTTCC AGAACAGCGA AGTCGAGAAG
TTGAATGTCA TCCAGGGGAA GAGCGACTTC TCGCACCACT GGGTGCTCAG TCTCGATGAT
GTGCCCAACC TGCGCCAGAA TGCTGAAGCA GGCGGGTATG AAGTGCGGTT CTGGGAGAGC
GGATCCGGGT CGGGAACCTC GTTCTTCTTC AGTTACGACT ACAACGATCC GAAGTGGCGG
GAATTGATCC GCAATCCGAA GTTCCGGCAG GCGCTCTCGC TGGCGTTCAA CCGCGCTGAA
CTGCAAAAAA CGCAGTACTT CGGCACCGGT GAGTTGACAA CCGGCACCTT CAGCCCGAAA
GCCATCGAGT ACAATATCGA CGAAAAGGGG AACCCGGACC GGGCAAACGC GCGGTACCGC
GAATGGCGCG ATAGTTACGT GGCGTTCGAT CAGGAACGGG CAAAGAAACT GCTCGACGAC
ATTGGGGTCA AGGTTGGTCC CAACGGTTTC CGTACCTTCC CCGACGGTTC ACCGCTGGAG
ATTTTGCTGG TCGTCGCCGC CAACACCAGC AAGAACACGA TTGCTCAGAA TGAGCAGATG
ATCCGCGACT GGGGGCAGAT CGGCATCAAG GCGACGCTGA CCCCGGTGCC GCCGCAGGGA
CGCCGTGAGG ACTGGTTCGC CGGCAAACTG ATGTCGAACG CCGACTGGGG CATCGGTGAT
GGTCCGAACC ATCTGGTGTA TCCGCAGTGG CTGGTGCCGA TTGAGCCGGA ACGCTGGGCG
CCGCTTCACG GACAGGGGTA TCAGTTGCGC GGTACGGCAA GCGAGAAGGA AGAACTGGAC
AAAGATCCGT GGCAACGCGC GCCTGCCCGA ATCGTGCCGA CCGATAAGGA TTTCGACCCG
ACCATCGCAA AACTGCACGA GATCTACGAT AAGACGAAAG TCGAACCGGA TTTCCTGAAG
CGCACACAGA TGGTCTGGGA GATGATCAAG ATCCACGTCG AGAACGGTCC GTTCGTGCAG
GGGTCGGTAG CGAACTTTGA CCGCGTGTTC ATCGTCAAGA AGGGCTTGAT GAACGTTCCC
CGGAAAGAAG ACCTTGCGCT CGGCGGCTTC ACCGATCCCT GGATCCATCC AACGCCGGCG
GTGTACGATC CTGAAGCATG GTATTGGGAC GATCCGGCGA AGCATAGCGG TTGA
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| Protein sequence | MFFRNRCSPR SSHSDISYEE VPVSRTRTLS RRRFLTLSAM TAASAAIAAC GGGQPAQAPT
SAPAPTSAPA PTSAPAPTVA IPPTTPPQAT AVPQAVSRFK ESPELAKLVA EGKLPPVDQR
LPKNPYVVPH KWLSVGTYGG TLNFTNSWGP DGMATIVQES QYGHSILRWL DDGLKIGPGL
AESWEANADA SEWTFKFREG LKWSDGHPWT VDDILYWWEY MVGGNGKEKE FPEGLKPIEP
PPDEGRSGTG TLATLIKVDD YTLTMKFDAP APLTADRLAM WVNAGIGPRW MAPRHHMEQF
NPVLNPAKYK DWDEHTKRIR FVTNPDCPTM TGWKCESFEE GVRGVYTRNP YYWCVDAEGN
QLPYIDRIVS TTFQNSEVEK LNVIQGKSDF SHHWVLSLDD VPNLRQNAEA GGYEVRFWES
GSGSGTSFFF SYDYNDPKWR ELIRNPKFRQ ALSLAFNRAE LQKTQYFGTG ELTTGTFSPK
AIEYNIDEKG NPDRANARYR EWRDSYVAFD QERAKKLLDD IGVKVGPNGF RTFPDGSPLE
ILLVVAANTS KNTIAQNEQM IRDWGQIGIK ATLTPVPPQG RREDWFAGKL MSNADWGIGD
GPNHLVYPQW LVPIEPERWA PLHGQGYQLR GTASEKEELD KDPWQRAPAR IVPTDKDFDP
TIAKLHEIYD KTKVEPDFLK RTQMVWEMIK IHVENGPFVQ GSVANFDRVF IVKKGLMNVP
RKEDLALGGF TDPWIHPTPA VYDPEAWYWD DPAKHSG
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