| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2885 |
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| Symbol | |
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| ID | 5209854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3599559 |
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| End bp | 3602534 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640596481 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001277203 |
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| Protein GI | 148656998 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATGCA ATCGTGCCCT TGTATGGCTT GGAATCCTCC TTATTGCGAG CATGCTGCCG
GTTTCATCCC CCACCCACTC GACCGCCATT GCGCAGAGTG CGCCCGATGG ACCACAACCG
GGTGACGTGT TTCGTGAGTA TGCATTTCCG CAACGCCTGA CACTCTGCTT CCGTCCTTCC
AATTCTGCAT CGTGCAACAA CATTCCGGTA GAACGCTCTG CGGGTCTGAC ATTCAACCCG
GCTGGCGCAG TGCGCGCTGA ACTGGCGGTC GAATACTGGG GCGGTCACAT CGGAACCCGC
CAGCATTTTC GCGTCAACAG TCAGGATTAC TGGCAACCTT TGCCACCGAT CCAGAATGTT
CCCGCAGGCG CTCGCCAGCA CTGCTATTTC CGCTCCGTGC TGGGACGCAC CCTGCCGCTT
GATCTGAGTC AATTGCGAAA CGGCGAGAAT CGCTTCCGCT TTACAATCGG GCACAACAAT
CAGTATGGTC AGGACATCAG TTGTCCAGGC AACTTTGGTT GGGGAACAAC GTATGTCTAC
GGTTTCATCG CCCGCCTCTA CTACACACCC GGCAGTATTC CCGCTCCCGG CGGCACAATC
GTATCGCCCG CCCAAAACGC GACCATCGGT GAAATGCCGC AGATCACCGT CCAGGCGACG
CCTCCAACCG GACGGACAAT AGCGCGGGTT GATGTGATCG GTGAGTATCT CGATTACGAC
TGGGATGGCA ACGGCGTGTT GCGCGAATGG CAGTACCAGA TGGCGCGCAC CCAGATGCAA
CGCCATATCG GTCAGGCGGT GCGTGACGGA AATGTGTATC GCGTGGTGTG GAATACGACA
TGGATTCCGG ATCAGGTCGA TGCGAACGGC AACCCGTTGC CGGTCCGTCT CATGGCGAAG
ATCACCGATA GCGACGGGGT ATCGATTATG ACCGCAGCGC GCACCGTATG GTTTCAACGC
AGCGGTCGTC AGGTGCGTAT GTACACCTCC TCACACGATC ACGGCGCTTC AGCGCAGCGC
GTCTTTGGCG TGCCGCAGAA CTTTGGTCCG CGCAATTCGC AGACCGTGAC ATCGACCCTT
ACCATCGCCG ATGATCCAAC CGGCGCCGCC GCCGCACGCA TGATCATCCA TACATGGGCT
GGCGATCAGA CGAAAGAAGA GCCGACGGTT CGTGATCGTA TCACGATCAA CGATGTTCCA
ATCGTTAATG TCAATGCCCG CGCTCCCGAA ACTCCCACCC CGCCGATTGG CGCCGATCAT
CACTGGAGTT TCGACTGGCG CGATGTGCCG GTATCGGCAC TGATCCAGGG CGATAATCTC
TTTCGTGTGT GGACGAATCG GCAGGGTCAT CACCTGGAGA TCGCGTGGCC CGGTCCGGCG
CTGATGGTCG AATGGGTGGA CGCTCCTTAT GCCCATGACC AGGTGGTTGT CACTCCGGAA
GATACGCCGA TAACAATCAC GCTGACCGGA TCGACGCCTT TTGTCAATCC ATTGACGATC
GCCCCGATCA GCAATCCTTC ACGTGGAACG CTCAGCGGCG CAGGATCGAC CCGTATCTAT
ACGCCGCAGG CACATTACAA CGGAACTGAC CGGTTCGACT TCCGCGTTTC CAGCAGTGAT
GGGCAGGACA ACGGAACGAT CTATATCGTC GTTACACCGG TCAACGACGC ACCGGTGCTA
AACCCTGCAC CACGAACATT GCCATCCATC GATGAAGATA TCCCTGACGC CAGCAATCCG
GGCACAACGG TTGGCGCGCT GCTTACCGAC ATGGTTACCG ATGTCGATTC TGATGCTCTT
CCGGCAGGAA TAGCGCTGGT GGGCGCCAGC GGCAACGGGA CATGGCAGTA CTCGCTCGAT
GGCGCTGCAT GGCTGGATGT CGGCACGGTA TCGATAACCA GCGCGCTCAC GCTCGAACCA
ACCGCCCGGA TCAGGTTCCG TCCCGCACCG AACTTTTTCG GGCAGGCGAG TGTCACCTAC
CGCGCATGGG ATCGCAGTGA CGGCGCAGCC AATGGTCAGC GCGGCGTCAA TCCTGGCAAT
GGCGGCGGAA CGAGCGCCTA CAGCAGCGCC ACGGCAACGG CAACGATCAC CGTGAATCCG
GTCAACGACC CGCCGGAGAT CACACTCTCC AGCAACGTTA CCACGACCCA CATCCTGGCA
TTGTTCAATG TGAGCGGATC GGTCGTCGAT ATCGAAGACG AGACATTGAA CGTGACGATC
GATTTTGGCG ATGGCGTGTC CAATACCCTC ACGTCGCAGC GCACATTCGA TGTTACCCAT
CAGTACCAAC GCAGTGGCGC CTATACTGTC ACCGTGACGG TGCGCGACTC AGCACAGGCA
ACTGCCAGCG CGTCGTTCGT TGTGCGCGCT GTGAACGATC CGCCCGAAGT GACGCTCGAC
GCGACCACCC CTTCTTCTGT GCATATCTTC ACGCCATTCA GCGGCGCCGG TTCGTTCTCC
GACACCGAAA ATGACTCGAT CACACTCCAG ATCGACTTCG GCGATGGCAC GCCTGCGCAA
ACGATAACTC CAGCGACGGA TCGGACGTTC ACCTTCAACC ATCGGTATGA ACGAAGCGGA
CAGTACACGA TGACGGTCAC CGTGCGCGAC TCAGAATCGA CAACGCGCAC AACATACCCG
GTGCGGGTGA TCAATCATCC GCCGGTTGTC ACCATCAGCG CACCAGCCCA GATCAAACGT
GACGATCCCT TCGTCGGCGC CGGCTCATTC TCCGATGTCG AAGAGGTTCC GCTGAGCAAC
TGGAATGCGA CCGTCGATTA TGGCGATGGG AGCGGACCAC AACCTCTCGC GCTGTCCGAC
GAGAAGCGTT TTGTGCTGAA CCACTCCTAT GCGGAAGAGG GGACATACAC CGTCACTGTG
CGCGTCTCCG ATCGTGAAGG GGCGATCGGA ACGGCGTCGA TCTCTGTTCG CGTGAGCCGA
TACTTCGTCG TGTACGTCCC TATGGTCGTC CGCTAG
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| Protein sequence | MRCNRALVWL GILLIASMLP VSSPTHSTAI AQSAPDGPQP GDVFREYAFP QRLTLCFRPS
NSASCNNIPV ERSAGLTFNP AGAVRAELAV EYWGGHIGTR QHFRVNSQDY WQPLPPIQNV
PAGARQHCYF RSVLGRTLPL DLSQLRNGEN RFRFTIGHNN QYGQDISCPG NFGWGTTYVY
GFIARLYYTP GSIPAPGGTI VSPAQNATIG EMPQITVQAT PPTGRTIARV DVIGEYLDYD
WDGNGVLREW QYQMARTQMQ RHIGQAVRDG NVYRVVWNTT WIPDQVDANG NPLPVRLMAK
ITDSDGVSIM TAARTVWFQR SGRQVRMYTS SHDHGASAQR VFGVPQNFGP RNSQTVTSTL
TIADDPTGAA AARMIIHTWA GDQTKEEPTV RDRITINDVP IVNVNARAPE TPTPPIGADH
HWSFDWRDVP VSALIQGDNL FRVWTNRQGH HLEIAWPGPA LMVEWVDAPY AHDQVVVTPE
DTPITITLTG STPFVNPLTI APISNPSRGT LSGAGSTRIY TPQAHYNGTD RFDFRVSSSD
GQDNGTIYIV VTPVNDAPVL NPAPRTLPSI DEDIPDASNP GTTVGALLTD MVTDVDSDAL
PAGIALVGAS GNGTWQYSLD GAAWLDVGTV SITSALTLEP TARIRFRPAP NFFGQASVTY
RAWDRSDGAA NGQRGVNPGN GGGTSAYSSA TATATITVNP VNDPPEITLS SNVTTTHILA
LFNVSGSVVD IEDETLNVTI DFGDGVSNTL TSQRTFDVTH QYQRSGAYTV TVTVRDSAQA
TASASFVVRA VNDPPEVTLD ATTPSSVHIF TPFSGAGSFS DTENDSITLQ IDFGDGTPAQ
TITPATDRTF TFNHRYERSG QYTMTVTVRD SESTTRTTYP VRVINHPPVV TISAPAQIKR
DDPFVGAGSF SDVEEVPLSN WNATVDYGDG SGPQPLALSD EKRFVLNHSY AEEGTYTVTV
RVSDREGAIG TASISVRVSR YFVVYVPMVV R
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