Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2659 |
Symbol | |
ID | 5209628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3301838 |
End bp | 3303994 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640596261 |
Product | glycosyl transferase family protein |
Protein accession | YP_001276983 |
Protein GI | 148656778 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCATC GATCGCAGGC GCGTATCTTC CTGTTGATCA TCCTCGCACT CGCGCTGGGA TTACGTCTCA TCCTCTGGAG TCAACCGCTC CACGAGCCAG CCAACGATGA GGTTGAATAC ATCACTGTTG CGCGCGACCT GCTAGAAGGG CGCGGATGGT CGTTCTACGA GCAGTACCAC TGGTTGCGCG CTCCCCTCTA CCCGTTGTTC CTGGCAGCAT CCTGGCGGCT TGTGGGCGAC GATGGCTGGC CCTATGCCAC GCGTGCGTTG CATCTGGCAG CGCTGCCCAA CATTCTGCTC AGCGTCGTGA GCGTGTACCT CACGTACGCA CTGACCATGC GACTGGTAAA GCACCAGCAA TCAGCACTGC TAGCAGCGTT GATCGCCGCC GTCCTCTGGA CGAACGCCAC ATTTGCCAGT CTGTACATGT CTGAGACGCT CTTTACCGTG CTGTTTCAGG TCGGAATGCT GATGCTCCTC CATGCAGCGG ATCAACAACC GGCATCGCAA CGCTGGCTGC TAGTCATCGC CGCAGGAGCG GCGCTGGGAC TCGCTGCACT GACCCGGTCG CTGGCACTCC TGTTCCTGCT CGTCGCGGCG CTCTGGCTGG CGTTTCAGGT TTTACGGCGA AACCCGTCCG GCGATGTTCG ACGCCGGTTG ACGGTGCCAC TGTTGACCGC GACCCTCTTT TTGCTGAGCA CCGGAATGGT CATCGCACCC TGGACGATCC GCAACTACCA GGCATACGGC GGGTTCATCC TGATCGAAAC CGGGCTATCG TACAACCTGT GGGTCTTCAA CGAACCGCGC GAAGACCGCG ATACTATCCA TCGGATACTT GAAGGCATCA GCAACCCGGT CGAGCGGTCG AACTATGCGA CTGCACGCGG ATTGGAGCGT CTGCGTGAAG ACCCGGCGAT TCTGGTGCGG AAACTCTGGC CCAACTGGGT CTTTCTGGCG CGCGTCAAAC CGATCCAGGA TCGCTTCCTG ATGGAACATT ACGTTGCCGA CGTTGATCTG CCGCTGTTCG TCGCCGCCCT GATCTCCGAC GATCTGCTGT ATCTCCTGAT CACGATCGGC GCGATCATTG GTCTGGCGCA CGCAGTGCGC ATACGCAACA CACCATCCGA TCAGCAGTTC CACCAATCCT GTCATCTGCC GGTTGCTCCG GCTGTGCTCT GCCTGCTCTG GATCGGCTAC GCGATTGCGA CGATGCTGCT CACCCACGGT GAAGCGCGCT ACCGACACTT CCTCTTTCCG ACACTCATCC CATACGCAGC ATGGACGTTC ACCATACTGA CGCAGCGCAT CGCCTGTTTT GAGCGTCGGC GTCTGCTGAT GATCGCACCG CTGGTCTGCA TCTTTCTCTG GACGGTGCTG ACCGCCTACC CGTGGGCGTG GGCCGGCGAA AACCTGGCGC GCGGCAGTCG CGCACTGATC GGTGACGTAT GGATGGCGCT GGGCGCGCCG GATCGCGCAG CGCGCGCCTA CCTGAGCGCA CTGAGCGTCA AAGCGACGCC TGATGGATGG CTGCGCCTGG GACATGCGCA TCTGGCGCGC GGCGAGATTG CGCAGGCGCG CATTGCGTAC CGCGCAGCAT GGGACGCGAG CCGGGTGTAC TTTATCGCCA GCGCCCGTCT CGGTGATCTG GAACGTTCAC TCGGAAATCT GGACGAAGCG CGACGCGCAT TTGCCGGGTA TTACGCCGAC GAACAGCGCG TCACCGACTG GTCGTGGCGG ATGCTGGGGC GCGATCCGCC GTCATCCCTG GACGTCGGCG ACGGACTCGA CTTCGGGTAC GTTGGCGGCG TCTATCCGGC TGAAGAACTT CAGGGCGTGC GGGCGCGCTG GAGCGCGGGA CGCGCACTGT TGCGGCTCGG CAGCGCCACA ACGAACACGC AGGCGCTGCT CACCCTGCGC CTGGCGGCGC CGCACCCTGA ACGGAACGCC GTCCCTGCAC GTATTTGCGT TGATGGAACC TGTCGCAGTA TCTCCCTGAG CGCTGACTGG CGCACGTGCA CCTTCATCGT GAATCCACAG CACACGACAA TCCTTGTTGA AGTGGAGAGT CCGACGTTCA CGGCTGCCGA CGGGCGTCGG CTGGGGGTGC TGATCGACCG CGCGCATCTG ACGGTGCTCG TTGCCGGGTC AGAGTGA
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Protein sequence | MTHRSQARIF LLIILALALG LRLILWSQPL HEPANDEVEY ITVARDLLEG RGWSFYEQYH WLRAPLYPLF LAASWRLVGD DGWPYATRAL HLAALPNILL SVVSVYLTYA LTMRLVKHQQ SALLAALIAA VLWTNATFAS LYMSETLFTV LFQVGMLMLL HAADQQPASQ RWLLVIAAGA ALGLAALTRS LALLFLLVAA LWLAFQVLRR NPSGDVRRRL TVPLLTATLF LLSTGMVIAP WTIRNYQAYG GFILIETGLS YNLWVFNEPR EDRDTIHRIL EGISNPVERS NYATARGLER LREDPAILVR KLWPNWVFLA RVKPIQDRFL MEHYVADVDL PLFVAALISD DLLYLLITIG AIIGLAHAVR IRNTPSDQQF HQSCHLPVAP AVLCLLWIGY AIATMLLTHG EARYRHFLFP TLIPYAAWTF TILTQRIACF ERRRLLMIAP LVCIFLWTVL TAYPWAWAGE NLARGSRALI GDVWMALGAP DRAARAYLSA LSVKATPDGW LRLGHAHLAR GEIAQARIAY RAAWDASRVY FIASARLGDL ERSLGNLDEA RRAFAGYYAD EQRVTDWSWR MLGRDPPSSL DVGDGLDFGY VGGVYPAEEL QGVRARWSAG RALLRLGSAT TNTQALLTLR LAAPHPERNA VPARICVDGT CRSISLSADW RTCTFIVNPQ HTTILVEVES PTFTAADGRR LGVLIDRAHL TVLVAGSE
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