| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2507 |
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| Symbol | |
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| ID | 5209476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3099100 |
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| End bp | 3100956 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640596112 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001276834 |
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| Protein GI | 148656629 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5305] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.363924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCACA CTCCACATCT GACATTTCCC GCCCCCGGTC TCGCGGCGCT CTTCGCAATT
GCGCTGGCGC TGCGCCTCTA CCGCATCGAT GCCCAGAGTT TCTGGTACGA CGAAGGGCTG
ACGATTGCGC TTGCCGTCCA GCCGCTCGAC GCCATCGCGC GCGCCGCCGC CGCTGATGTG
CACCCGCCCC TCTATTACTG GTTGCTCCAC GGGTGGGTGC TGCTGATGGG GACCGGCGAA
GCGGCGGCGC GCGCGTTCAG CGCAGTGTGC GGTGCAGCCG CTGTGGTTCT GACGACGATC
CTCGGACGGC GCTGGTTCGG CGAGAGCGCC GGATGGCTCG CCGGCATCGC CGCCACAGTC
TCCCCTTTCG CCATTCATTA CAGCCAGGAA ACCCGCATGT ACGCGCTGGC AATGCTGCTG
GCAATCTGTC TCTGGCTGGC GTTTGACGCT GCAATCCGCG AACAGTCAAC GCCGGACACA
CCGCGCACGC TGCGACAATC ACGCTGGATG TGGTGGATAC TCTACAGTCT CACGGCACTG
GCAGCCCTTG CGACTCATTA CTTCATGGTA GCATTTGTGG CAGCGACGGC GCTTGCGGGT
GCGCTGGTTC TGCGACGCAA TGCGTTGCTG CTGTGGATTG CCCTGCACCT GACTCTCGCC
GGGTTCTTCC TTTTGCTTGT CTGGGGAAGT CGGGAGCGTC TGGCAGTCTG GACATTCGCC
AAACAACCGA CCGACCCGCT CTTCATCCTG TCTGATGCGC TGCGCGTGTT CAGTCTTGGA
CCGGCGGCGG CGCCAGTGTT CTGGTTCTGG CTCATCGGCT TCGTGGCGCT GCTGGCGCTG
GCGTTGACGA CGTGGCGCAC ATCGCCGCGC GCGACCGGCA TGGCGCTCGC CTGGCTCGTG
GTTCCGCTGG CAGCGATCAT CATCCTTTCC CTGAACCAGC CGTACTACAA AGCGCGCTTC
CTGCTCCCGG CGCTGCCGGC GTTTCATCTG CTCCTCGGCG CTGGCGGATC AACGCTGGCG
CGCAGCGCGC CAGCGCATTC CGGCGCGCTG CTGACCGCAA TCTGGCTCAT TGCCGCCGCT
GTGACGCCAC TGCGTAACGA GTGGTTCGAT CCCGCCTTCC AGCGCGACGA CTACCGCAGC
CTGACGCGGG CAATCGCGGC GACTGCACGC CCCGACGACG CTATCCTGCT GATCGGTCCG
GGTCAGATCG ATGTGTTCGA CTATTACTTC CACGGTTCAC AGACCCGCTA TCTCCTGCCG
CGCTTCCGAC CTCTCGATCC ATCCTCCACG ATCGCCGAAC TCGAACAGAT GGCGCAGCAG
CACCGGCGGG TATACGGCGT CTTCTATGTT CCCTACGAAG CCGACCCGAA TGGCGTGGTG
AACGCCTGGC TCGCCGACCA CGCTTTTCGC GCCGAAAGCC GCTGGTACGG CGGCGTCGAA
CTGGTTGTCT ATGAACTCGG ATCGGTCGGC GCTCCGCTAC GTGCGATGAA CGCGCGTTTC
GGCGACGCCT TGCTGCTCGA ACGCGCCGCA GTCTCGTCGC TGAAGATTTC GGGCGGCGAT
GCCGTGCGGA TCGAACTGCA CTGGCGCGTG GTTGCACCAC CCGGACGTGA CCTGATGATC
TTCGTTCATC TGCTTGATCC GAATAACCGG ATCGTCGCGC AACACGACGG TCCCCTGGCG
CCAGTTCCCA CAACTGCGTG GCAACCCGAC GAAACCCATC GCAGTCGGGC AGCGGCGCTC
GTCCCGCCCG ACGCGCCGCG AGCGACGTAC CGCCTGCTCA TCGGGGTCTA CGACCCGCAA
ACCGGCGAAC GGCTGCGACT CGACGATGGC AGAGATGGGG TGGAAGTGGG TGCGTAG
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| Protein sequence | MGHTPHLTFP APGLAALFAI ALALRLYRID AQSFWYDEGL TIALAVQPLD AIARAAAADV
HPPLYYWLLH GWVLLMGTGE AAARAFSAVC GAAAVVLTTI LGRRWFGESA GWLAGIAATV
SPFAIHYSQE TRMYALAMLL AICLWLAFDA AIREQSTPDT PRTLRQSRWM WWILYSLTAL
AALATHYFMV AFVAATALAG ALVLRRNALL LWIALHLTLA GFFLLLVWGS RERLAVWTFA
KQPTDPLFIL SDALRVFSLG PAAAPVFWFW LIGFVALLAL ALTTWRTSPR ATGMALAWLV
VPLAAIIILS LNQPYYKARF LLPALPAFHL LLGAGGSTLA RSAPAHSGAL LTAIWLIAAA
VTPLRNEWFD PAFQRDDYRS LTRAIAATAR PDDAILLIGP GQIDVFDYYF HGSQTRYLLP
RFRPLDPSST IAELEQMAQQ HRRVYGVFYV PYEADPNGVV NAWLADHAFR AESRWYGGVE
LVVYELGSVG APLRAMNARF GDALLLERAA VSSLKISGGD AVRIELHWRV VAPPGRDLMI
FVHLLDPNNR IVAQHDGPLA PVPTTAWQPD ETHRSRAAAL VPPDAPRATY RLLIGVYDPQ
TGERLRLDDG RDGVEVGA
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