Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2498 |
Symbol | |
ID | 5209467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3087460 |
End bp | 3088323 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596103 |
Product | gluconolactonase |
Protein accession | YP_001276825 |
Protein GI | 148656620 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.393695 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCCA TGAAGCTGAA AGCGCTGATC GAACCGGGCG ATCCTGAACG CATCGCTGGC GGTTTTGAGT TTACTGAAGG TCCGGTCTGG CATCCAGACG GTTTTCTGAT CTTTTCGGAC ATTCCTGCCA ACCGTCAGTA CCGCTGGCAT CCTGTCCATG GCGTATCCAT CTGGCGCGAA CCGAGCGGTC ACTCGAACGG ACTCACCCTG GACCACGAAG GACGCATCAT TGCGTGCGAG CACGGTGGTC GGCGCGTCTC ACGCGCTGAG CCGGGCGCCG AACCGGTGAC GCTGGCGGAT ACGTATGGCG GGAAGCGCCT TAACAGCCCG AATGACGTCG TGGTCAAATC GGACGGCACA ATCTATTTTA CCGATCCACC CTACGGCATT GCGCCCGAAG AGCGCGAACA GCCGTGCAAC GGCGTGTATC GCATCTTGCC CGACGGAATG GTCGAACTGC TGGTCGACGA TTTTGATCGC CCCAACGGAC TGGCATTTTC GCCTGATGAA ACGATCCTGT ATATCGATGA TTCCCCGCGG CGTCATGTGC GTGCGTTCGA TGTCCTGCCC GACGGTCGGC TGGCAAACGC ACGTATCTTT GCCGATATGG ACCATCCGCA ACCCGGATCA CCGGACGGAA TGAAGGTCGA TGTCGAAGGG AACCTGTATG TCACCGGCGC AACCGGGGTA TGGGTCTTCG AGCCGGATGG GACGTGGCTG GGGGTGATCG CCACGCCGGA GCGCCCGGCG AACTGTGCCT GGGGCGATGC CGATCGCCAG ACTCTCTACA TCACGGCGCG CACCTCGCTC TATCGCATTC GCACGCGGGT TCCCGGTCTG CCGGTGATTC GTGAGCGGAC GTAG
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Protein sequence | MPAMKLKALI EPGDPERIAG GFEFTEGPVW HPDGFLIFSD IPANRQYRWH PVHGVSIWRE PSGHSNGLTL DHEGRIIACE HGGRRVSRAE PGAEPVTLAD TYGGKRLNSP NDVVVKSDGT IYFTDPPYGI APEEREQPCN GVYRILPDGM VELLVDDFDR PNGLAFSPDE TILYIDDSPR RHVRAFDVLP DGRLANARIF ADMDHPQPGS PDGMKVDVEG NLYVTGATGV WVFEPDGTWL GVIATPERPA NCAWGDADRQ TLYITARTSL YRIRTRVPGL PVIRERT
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