Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2287 |
Symbol | |
ID | 5209254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2824222 |
End bp | 2825217 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595892 |
Product | peptidase M23B |
Protein accession | YP_001276616 |
Protein GI | 148656411 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTA CACTCCGAAC CCTCCGACGC AATCGTGGAT TGACCCTGAC CGATCTGGCA CTCCTTACCG GTATTCCGGC GCGCAACCTC GGCGCTATCG AACTTGGCAT CCTGAGCCTC GATAGTGTTA CCCGCGCACA ACTGGCGAAC GTCCTCGCGG TGGCGCCTGA AACGTTTCCC AGCGCGCTGC ACGTTGCAGC ACAACCTCCG CGTTTGTTCG ATCTTCAGCG TCTGGCGACG CCGTTTGCCA TTATGCTGAC GACCACCGCC CTGACCACAT CGCTGTTGTC TCACGTCGAG TTTCTGCCCG CCCTGCCCCA ATCGATTGAA TCGCCGCCTG CTCCGCTTGC TGCGCCTGTT GAACGCCCTT TGGAAACGGC GCCCGTCGGC GGGGCGCTCC CCGTTGCAAT GTTTGCTGCG GCGATCCTGG ACACTGCCGC CGATCCTCAA TCTCGTCACG AGACGCCGCC ACCGCTTCCG ATCAGATCGT CCGAGCCGGT CATCGAACCG GCGTCGGTGG CGCCTGCCAT AACTATCGGC GCGAAACACG GTGATCGTGC TGCACCGCGA GGTTACCCGC TCATTGCACC GGTTGGGCGG ATCGTTGTAA CGCAGGGGTA TGGTGAAGGA ACACATGCAC CCGCAACGAT CTGGGGTGCG CTCGACTTCG CCATCGATAG CGACGGCGAC GGATACGCTG AGCCAGGAGC AACGCGCAGC GCACCGGTGA TCGCCACCCA CGACGGGATT GCACGGGTGT ATCCCGGCAG CTGGCCCGGC GGCAACTTCG TCCGGATCGA AAACCGTGAA ACGGGATGGG TCACCGCATA TGGGCATTTA GATAGCATCA TGGTTAGCGA AGGACAGGTC GTGCACCGCG GTGCACAGAT CGGCACAGTC GGCAGCACCG GCTATGCGAC CGGACCCCAT CTTCACTACG AGATCTGGCG GCAGGGGATC AACATCGATC CAACGCCGTT CGTGTTCGGG CAGTAG
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Protein sequence | MTATLRTLRR NRGLTLTDLA LLTGIPARNL GAIELGILSL DSVTRAQLAN VLAVAPETFP SALHVAAQPP RLFDLQRLAT PFAIMLTTTA LTTSLLSHVE FLPALPQSIE SPPAPLAAPV ERPLETAPVG GALPVAMFAA AILDTAADPQ SRHETPPPLP IRSSEPVIEP ASVAPAITIG AKHGDRAAPR GYPLIAPVGR IVVTQGYGEG THAPATIWGA LDFAIDSDGD GYAEPGATRS APVIATHDGI ARVYPGSWPG GNFVRIENRE TGWVTAYGHL DSIMVSEGQV VHRGAQIGTV GSTGYATGPH LHYEIWRQGI NIDPTPFVFG Q
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