Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2207 |
Symbol | |
ID | 5209170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2719771 |
End bp | 2722587 |
Gene Length | 2817 bp |
Protein Length | 938 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640595809 |
Product | hypothetical protein |
Protein accession | YP_001276537 |
Protein GI | 148656332 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.120954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACG ATGCAGACAA TCGCCGGTCG CCATCACCGG TGCGTGATGC AGCAATCAGC GCGAGTCGCG TTGCCGGGCA ACGTGCGCTG CGGGCAGTCG GGTCGGCGCT GATGAAAACC GGCGCAGCCG CCGGTGGAAA GGTCATTGTC GTTGCGGCGC TGGTTGTGCT GACGATCATC CTGATCGGCG GACTGATCCT GATCATTGTG GGCGCGCTCG GCGCCGTCTT TCAGCACACT GCGCTGCCCT GGCCCGTGCC GCCGGACGTG CTGCCCGACG GAACCTATCG CGCAGGCGGT TGGGCCATCT CCAGTCGCTT CGGCTGGCGT CGTCATCCGA TCACTGGTCA ACCGGAGTTC CACGATGGCA TTGACATCAT CAACCCGACC GGCGCATGCC CGTTCGGATA CCGCTGCCTC CTACCGGCAA TGTTCGACGG GATGGTCACC CACGTTGGGT GGGACCTGAA CGCACCGCGT CGTCCGGCGC AGGAAGGCGG CGGTCAGACT GTCATTGTCG AAAGCAGTCG CGGCGCATAT CAGACGATCT ACGCCCATCT GGAACCATAC CGCTTGTATG TGCAACTCCA GGGGCGGATC GTCGATGAGT ATGGGCGCTA CGACGAGTAT GCCGACTACC AGCCGATCGG CAGCGGCGAA CTGGTTCCTG ATGTGGACGA AGGATCGATT GCGATCTGGT GTCAGGGAGA TATGCCGGTC TTTGTGCCGA CACGCGACGG CGGGACGATC ACCTTTCTCT ATGACCGCCC GGCATCCTGC CAGACAGGTG TGATCTGGGG GGAACGCGGC AATGGCTGGC GCGGCTGGAT TGCCGACGAT CCCCCAGCGG ATGCGCAGGG ACGGGCCACG TTGCGCTGGC AAACGCCGCT GAGCGGTGTG CGTGGTCAAC GCCGCGCCGG GGATGTCGCG CTCCGTTTCC GCGCGCATCT CGTGCCGCCG CCGCCCCCGC CGACCGCAAC CCCGACGCCG GGAGCGCAAA CCCCAATCGC AGGCGGACAC GCGCCGGACA GGATCGATCT CGCAGCGCAC CAGGGCAGCC AGCGAACCGG TGAACCCTGT CAGCCATACG GCACTGGCGT GTACTGCGTG TGGCGACTGG CGGACATTCC GGTTGCGCCG CGTCAGGATG CCCGTCGGCG AGTTATGTCC GGCGTGGGAA GCCTGGAACG TGAAGCGCAG ACCGGTCTGT TCTCTCGCCC GCCTGACGCA CCATCATCTG CCGCGACACC AACCCGACAA ATCTCTTCCT TTCTCACACT CAGCATGAGC ACAGTCGGCG CCCCTCATCT GCCGGTGGGT GGACGTCGCC GGGTCGCCCT GTCTGCCACC AGTAGCGACT GGCCCCTGAC GGTTGATGTC GATGTTGGCG CGAACCTGAT GGTGTTGGAC ATCACCGATG TCTCCGGCGA CGTGCGATGT ACCTCTACAG CGCACACCGT CCGATGCGAA GGGGGTGGTC CGTATGTTCT CTTTGCCGGG TTCGTGGTGG AAGTGTTGCC AGGTGCAGCA ATGGATAGTA TTCAGACCCT TCGCAGCGTG GCTGCATCAC CGGTGCAACA GCAGACAACG ATGATACATC TGCTCATCGA GCCATACGCG GTCACACCTG GACCCTGGCC CCCGCCAACT CCGCTGCCGA CCACCACACC GGCGCCTTAC CCTGCGCCGG TGACGCCAGC AGTTCCCCCC GCGCCACCCC TGCCGGGAGT GACACCCATC GCAGGACCTT CCCCAGGACC CGGACGGGGA CCGGGAGACT CGCCGCTGGT GTGTCGGGTG CAGGCGCTCG TTCCCCTGCC CGGCGTTGTG AACGCCGCTG GTACGACGAC AAACATGCTG CTCGCCGAAG ATGCAGCGCG CAGTTTTGCC GCAGTGCGCG CCGAGATCAT CGCTGCAACC GGGCACGATC CGCTTGCACG GCTTGCCGAT GCGCTGCGCC AGCCGGAGTT CCGCTCAAAC AAGCCGGGGG TTGCCCTGAT GTCGTGGCAT ATGACCGGTC GAGCCATCGA TGTGGACACC GGCTATTCCT GGCGGCGGGT GCGTGAAGGG CGTATGTGGC GGTTGTATCT CAACCTGACC GATGTGACTG CGATCTTCGA GCGCCACGGC TGGAACCGCA TCCCGGATCG CGCCGATTCT CAGGAGTGGT GGCATTACGA ATACCACCCG AATGGCATCA GTTGGGCAAG CGCCATGCTG GAGGTCTGGA GTATGCAGCG TCTGCAAGCC GCATTTCCGC AGATCAACTG GAGCAGTATC GGTTGCCAGG CGCCGCCGCC GGGTAGCGAT ACCTTCCCCG AAGGCGATAT GCACGAACGT TGCGTGGCAG GTATTCCCTC GTTTGCGCAT CCCGTCGAAA CACTACCGGG ATGCGGACCA CCAGTGCGTC CTGGCGATCG GGTGTATCAA CTGGAGTCGC CGGTGGGATT CGTCGGGCTG ACGGGGCTTA CCACCGGACC GCACCTGCAC CTGGGGATGC GGCAGCGCGA TTACACCGGC AGTTTCCCGA TGATCAACAT CTGTACACCC GAATGGTTGC AGGGTCTCCA GCCGCCGCCG GAAACAAACT GCTGGACCGA TATGGTCGAT CCGCTGGCAT TTCTGCCGCT GGCGCCACCG GACAACCCGG CAGGCTTACC CGAAGGAGCG CCCTATCAAC TACCACCGCC GAACTACCCC GGTTCGCTCT ATCGTGAGCC GCGTCCCGGC GAACCACCGG TCGGGCAGTA CTGGTCGCCC GACGCTGACG GTGGACAGTA CGGCGGCGGC AAAGCAGGCA GATCGACATC GAGGTGA
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Protein sequence | MNDDADNRRS PSPVRDAAIS ASRVAGQRAL RAVGSALMKT GAAAGGKVIV VAALVVLTII LIGGLILIIV GALGAVFQHT ALPWPVPPDV LPDGTYRAGG WAISSRFGWR RHPITGQPEF HDGIDIINPT GACPFGYRCL LPAMFDGMVT HVGWDLNAPR RPAQEGGGQT VIVESSRGAY QTIYAHLEPY RLYVQLQGRI VDEYGRYDEY ADYQPIGSGE LVPDVDEGSI AIWCQGDMPV FVPTRDGGTI TFLYDRPASC QTGVIWGERG NGWRGWIADD PPADAQGRAT LRWQTPLSGV RGQRRAGDVA LRFRAHLVPP PPPPTATPTP GAQTPIAGGH APDRIDLAAH QGSQRTGEPC QPYGTGVYCV WRLADIPVAP RQDARRRVMS GVGSLEREAQ TGLFSRPPDA PSSAATPTRQ ISSFLTLSMS TVGAPHLPVG GRRRVALSAT SSDWPLTVDV DVGANLMVLD ITDVSGDVRC TSTAHTVRCE GGGPYVLFAG FVVEVLPGAA MDSIQTLRSV AASPVQQQTT MIHLLIEPYA VTPGPWPPPT PLPTTTPAPY PAPVTPAVPP APPLPGVTPI AGPSPGPGRG PGDSPLVCRV QALVPLPGVV NAAGTTTNML LAEDAARSFA AVRAEIIAAT GHDPLARLAD ALRQPEFRSN KPGVALMSWH MTGRAIDVDT GYSWRRVREG RMWRLYLNLT DVTAIFERHG WNRIPDRADS QEWWHYEYHP NGISWASAML EVWSMQRLQA AFPQINWSSI GCQAPPPGSD TFPEGDMHER CVAGIPSFAH PVETLPGCGP PVRPGDRVYQ LESPVGFVGL TGLTTGPHLH LGMRQRDYTG SFPMINICTP EWLQGLQPPP ETNCWTDMVD PLAFLPLAPP DNPAGLPEGA PYQLPPPNYP GSLYREPRPG EPPVGQYWSP DADGGQYGGG KAGRSTSR
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