| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1962 |
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| Symbol | |
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| ID | 5208924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2441847 |
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| End bp | 2442773 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640595570 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001276299 |
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| Protein GI | 148656094 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.981543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTATCC GCGAATCGAA GTATATCTGG TTCAACGGCG AGATGGTTCC CTGGGAAAAG
GCGACCGTCC ACGTTATGAC GCACGCCCTG CACTACGGAT CATCGGTCTT CGAGGGAATC
CGCGCCTACG AAACGCCCCA GGGCGCTGCG ATTTTCCGCC TGCGCGAACA CATCCGCCGT
CTCTTCGATT CGTGCCGGAT CTACCGGATG GATCCGCCAT TCACGCCGGA TCAGGTGTTC
GAAGCCTGCC GTGCGGTAGT GCGCGAGAAC GGCTTGCAGA ACGCCTATAT CCGCCCGCTG
GTGTGGCGCG GCTACGGCGA GATGGGGCTG AACCCGCTGC GCTCACCGGT CGAGGTGATG
GTCGCCGCAA TGGAATGGGG CGCCTACCTG GGCGCCGAAG GGCTTGAACA CGGCGTGGAT
GTGCATGTTT CCTCCTGGCA GCGGGTCGCG CCGAATACCC TGCCGGCGAT GGCGAAGGCT
GGCGGTAACT ACCTTTCATC GCAGTTGATC GTGATGGAAG CGGCACGCAA CGGCTACGCC
GAAGGCATTG CGCTCGATGT GCATGGATGG CTGTCGGAAG GATCGGGCGA AAACCTGTTC
CTCATCCGCG ACGGCGTCAT CTACACGCCG CCGGTCACCG CCGCGCTGCT GCCCGGCATT
ACCCGCGACG CGGTGATCAC CCTGGCGCAG CAACTCGGCT ACCAGGTGCG CGAGCAAAAT
CTGCCGCGCG AGATGCTCTA CCTGGCGGAT GAACTCTTCT TTACCGGCAC CGCCGCAGAA
GTGACGCCGA TCCGCTCGGT CGATAAGTTG CCCGTCGGCA GCGGAAAGCG CGGACCGATC
ACAACCGCCA TTCAGAAAGC GTTCTTCGGG CTGTTCTCCG GCGAAACAGA AGATCGCTGG
GGATGGTTGA CACCGGCGGC GGAGTGA
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| Protein sequence | MPIRESKYIW FNGEMVPWEK ATVHVMTHAL HYGSSVFEGI RAYETPQGAA IFRLREHIRR
LFDSCRIYRM DPPFTPDQVF EACRAVVREN GLQNAYIRPL VWRGYGEMGL NPLRSPVEVM
VAAMEWGAYL GAEGLEHGVD VHVSSWQRVA PNTLPAMAKA GGNYLSSQLI VMEAARNGYA
EGIALDVHGW LSEGSGENLF LIRDGVIYTP PVTAALLPGI TRDAVITLAQ QLGYQVREQN
LPREMLYLAD ELFFTGTAAE VTPIRSVDKL PVGSGKRGPI TTAIQKAFFG LFSGETEDRW
GWLTPAAE
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