| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1915 |
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| Symbol | |
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| ID | 5208876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2379369 |
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| End bp | 2381072 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640595524 |
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| Product | WD40 domain-containing protein |
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| Protein accession | YP_001276254 |
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| Protein GI | 148656049 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00146751 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000119274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCGGTTCG TAACCCTGGC GCTCATTGCG ATCCTTGGAA CTGGCATCGT CCCTGCCAAA
GTGCACGCAG CGCAACAGGA CGGTCAGGGG CGCATCGTCT TTGCCGCTTC CCGCGGTGAT
GGCGGTGCAT TCGATATCTT TAGCGCCGAT CTGGCTGGCG AGCGTGTGGT GAATCTCACT
GCCGACCCGC ATCCCGACCG CAGCCCGTCC TGGTCGCCCG CAGGAGATCG CATTGTATTC
GCCAGCCGTC GCGCCAGTAA CTGGGATCTC TACGTGATGC GCGCCGACGG CAGTGATCTC
CGCCGCCTGA CCGAACATCC CGCCTACGAT GGCGAACCGG CATGGTCGCC TGATGGACGG
CAGATCGCCT TTACCAGTAT GCGTGATGGT CAGCTCGATA TCTATACGCT CGACCTGGAT
AGCGGTGATC TGCGACGCAT CACCAGCCAT CCATCCGCCG ACTCGCAGCC GACGTGGGCG
CCCGATGGGC GACGACTTGC ATTCACGTCG TGGCGCGACA GCAACCAGGA GATTTATATC
ACCGACGTAG AGGGCAGTAC GATTGTCAAT CTGACCAATC ACCCCGCTCC TGATCACAGT
CCGGCGTGGT CGCCCGATGG TCGCTTCATA GCGTTCATTT CGGATCGCGA CGGCGGCGGC
AACCTGCATA TCGCTGATCT GGTCACCGGT GAAGAACGCC GCGCCGGTCC AGACAACCTG
GGGTTGCGTG ATCCGGCGTG GACGCCAGGC GGCGGGTTGA TGGCGGTCGC CCCCTGGGCG
CTGGGCGAGC GCCGGTTCTT TTCACGGCAG GGGGTGGCGT TGTTCACTCC TGGGTTGAGC
GGCGGAACCT TCGTGGTTGC CAGTGTTCAC GGGTATAACC GCCCGGCATG GAGTAATCGC
GCGATTGCGC CATCACTGCC CGACGATCGC TGGCAGGACG GGCGTTCGTT CGCTGCGGCG
ACCGCGCCGG TCGATACCGC GTCGCTGCCG CGTGGCATGA CGCCGCTTGG CGATGTGCGC
GCTGGCGGTC TGCCGGTGCT TGCTGCGGCG GTCAAACCTT CATTCGATGC GCTACGCCAG
GAAGTCATCG AAGCCAGCGG GTATGACTTT CTCGGACAGT TGAGCGAAGC ATCGCGGGCG
GTCGATTTTC AGAATGGTAC GTCCTCGTTC ACCAGCTGGC ACAAGGCGGG ACGGGCATTC
GACACCCGCT GGGATTATCG TGTGAATGGC CAGCAGATCC TCTTTATTTC TCCCGAATGG
CGCGCCGGAC GGCTCTTCTG GCGCCTTTAC CTGCGCGCGG CGCGCCAGGA TGGACGTATG
GGCGAACCGC TGGCAGCGCC GGTCTTCGAT GCGCACAACC GCCGCCTGTT GCCGCCCCCT
GCCGGGTATT TCGTCGATTT CACGGCGCTG GCCGCCGCGC ATGGCTGGAA CCGGATCGCC
GCGCAGGAAC GTGAGACCTT CGACTGGCGC ACCCAACCGC TGGCGCTGGA ATACTGGCAT
TTTGAGCGCC GCGATGGGTT GAGCTGGTAC CAGGCGATGC GTCTGGTGCA CGACGACCAG
ACGCTGGAGC GTATCTTCAC CCGCGAGCGC GTGCTGGCAG CCGGCGCGCG CCCGAACTTC
CTCCCGTTCC TGGGGTTGCC CTGGGCGCAA TTGCCCCCGC CCGTCGCCGG ACCGATCACC
CTGCCGCCGG GGTATCGTCA GTGA
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| Protein sequence | MRFVTLALIA ILGTGIVPAK VHAAQQDGQG RIVFAASRGD GGAFDIFSAD LAGERVVNLT
ADPHPDRSPS WSPAGDRIVF ASRRASNWDL YVMRADGSDL RRLTEHPAYD GEPAWSPDGR
QIAFTSMRDG QLDIYTLDLD SGDLRRITSH PSADSQPTWA PDGRRLAFTS WRDSNQEIYI
TDVEGSTIVN LTNHPAPDHS PAWSPDGRFI AFISDRDGGG NLHIADLVTG EERRAGPDNL
GLRDPAWTPG GGLMAVAPWA LGERRFFSRQ GVALFTPGLS GGTFVVASVH GYNRPAWSNR
AIAPSLPDDR WQDGRSFAAA TAPVDTASLP RGMTPLGDVR AGGLPVLAAA VKPSFDALRQ
EVIEASGYDF LGQLSEASRA VDFQNGTSSF TSWHKAGRAF DTRWDYRVNG QQILFISPEW
RAGRLFWRLY LRAARQDGRM GEPLAAPVFD AHNRRLLPPP AGYFVDFTAL AAAHGWNRIA
AQERETFDWR TQPLALEYWH FERRDGLSWY QAMRLVHDDQ TLERIFTRER VLAAGARPNF
LPFLGLPWAQ LPPPVAGPIT LPPGYRQ
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