Gene RoseRS_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1839 
Symbol 
ID5208798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2271412 
End bp2272200 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID640595446 
Producthypothetical protein 
Protein accessionYP_001276178 
Protein GI148655973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.358856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAC AACGCATTTC TTTGTTCCTC GCAGGCGCGT TGGCGTGCGC GTTTGTCATC 
TTCCTGGTCA TGAGTGCGCC AGGGACGCGC AGTCGCGCCG AAGAACAGGC GCCGATCTTC
TTCGACCCGC CGCCAACGCC AATGCCGACG GTTGCACCCC TGCCAGCGCC GTCTGGTCTT
GCAGGAACGC AGGAGAGCGG CGCTCTGCTC TTCGCCGATT CGTTCGAGAC GCCGTATGGC
GACGGAACCC AAACCGGTCC GGCATGGGAC ATCGTCGATG TCGGGGTTGT TCTGCCGGAA
GATCGCGCTG CCTGGGTCGT CCGCGATGGA CGGTTGGTTC AAAACGGCAC CGCGGGTCCG
ACAGGCGATC CGCGCCCGAA CGAGACGCTG GCGCTCGTTG GATCACCGGA CTGGACGGAT
TACACGGTCA GCGCATGGTT TTACGATCGG TTCAATGCAG CGGCGGGATT GGTTGCGCGT
CGGCAGGGAA ACAGTTTCTA CCGTTTCATG ATCATCGCGA ATGACTACCC CGTCGCTTCG
CACATGATCC TGGAGCGCGT GGTCGATGGT CAGGCGACCG TCCTGGCGAC GCGTGAGGCG
CCAGGGTATG ATCGATGGCG CTGGCACCGT ATCAGCCTCA CCGTGAATGG CGCCCACATC
CGTGCTGCGC TTGACGGCGT TCCGATGCTG GAAGCCAGCG ACTCGACTCT CACGAGCGGT
CAGGCCGGGC TTTTCACCTA TGCGCTTGGC GGACTGCTCT TCGATGATGT TCGCGTGACC
ACGCCGTAG
 
Protein sequence
MKSQRISLFL AGALACAFVI FLVMSAPGTR SRAEEQAPIF FDPPPTPMPT VAPLPAPSGL 
AGTQESGALL FADSFETPYG DGTQTGPAWD IVDVGVVLPE DRAAWVVRDG RLVQNGTAGP
TGDPRPNETL ALVGSPDWTD YTVSAWFYDR FNAAAGLVAR RQGNSFYRFM IIANDYPVAS
HMILERVVDG QATVLATREA PGYDRWRWHR ISLTVNGAHI RAALDGVPML EASDSTLTSG
QAGLFTYALG GLLFDDVRVT TP