Gene RoseRS_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1804 
Symbol 
ID5208763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2228169 
End bp2229512 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content60% 
IMG OID640595412 
Producthypothetical protein 
Protein accessionYP_001276144 
Protein GI148655939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.038928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTAC CCCGCATTCG CGTCAGCGCC AACCGACGTT TCCTTATGAC TGAGCATGGC 
GAGCCATTCT TCTGGCTCGG CGATACTGCA TGGGAACTCT TCCATCGCCT GAGTCTGCCG
GAAGCGGAAC ACTATCTGGA CGTGCGGCGC CAGCAGGGGT TCAACCTCAT TCAGGCAGTG
GCGCTGGCTG AACTCGATGG TCTGCACACA CCCAATGCCA ACGGGCACAT CCCTCTGGCT
GGCGATGATC CGACTCGCCC CAACGAGTTT TATTTCCGGC ACGTGGACGC CATCATCCGC
ATGGCTGCCG AAAAGGGACT CTACATCGGA CTCCTGCCCA CATGGGGCGA TAAGGTTCAT
GCCCGGTTGT GGGGGATCGG ACCGGTCATT TTCAACACCG ACAATGCGCG CATCTACGGT
CGATTCCTTG GTGAGCGCTA CCGAAACGAC CCCAACATCG TCTGGATTCT GGGGGGAGAT
CGCCCTGCCG AAGGGTATGA AGCGATATGG ACGGCAATGG CGCAGGGCAT CACTGAAGGG
TTGGGCTTCA AGCCCTTCTT CACCTATCAT CCGATGGGGG GCATGAGTTC CTCGACCACG
CTCCATACCG CCGACTGGCT CGATATGAAT ATGCTCCAGT CCGGTCACCA TCTGATGGAT
GCGCCGAACT GGGAGATGAT CCGCGCCGAT TATGCGCGAA CGCCGGTCAA ACCGGCGTTG
GACGGCGAGC CAAACTACGA GCACCATCCA GTCGACCCAT ATACCCGTCT CTGGAAGCCA
GAGTATGGTC GCTTTACCGA TTACGATGTG CGCAAGCAGG CGTATCGTTC GGTGTTTGCC
GGCGCGTGCG GTTTCACGTA TGGCAGCCAT TCCGTCTGGC AGATGTATGC CCCCAAACAT
GAGCCGGTCA ACCACCCTGC GCCGACGTGG GACGAGGCGA TATTCGCTCC TGGCGCGCGC
CAGTTGATCC ATCTCAAGAA TCTGATGCTC TCACGCCCAT ACTTCACCCG CATCCCCGCG
CCTGACCTGC TGCCGGATGT GGCGCCGCTA TCGACGCACG TGGAGAAAGA TAACCGTGTC
AATCCCTTTC GCGCCGCACA CCCCGTCGCC ACACGCGACA GCGAGGGCGC GTATGGGCTG
GTGTACTTCC CGCTGGCGGA GCAGACCCTG ACGGTAGACC TGCGCCCATT GCGCGGGCAC
ATCAGGGCAT CCTGGTTCGA TTCCCGCAGC GGCGGAACCC ACCCTATCGG TGGGTATGAA
CGGAACATCG TAACCTTCAC CTCGCCCATC GCCGGACCGG ACTGGGTCTT GATCCTGGAT
GCAGAATCAA TGACCCAACT GTAA
 
Protein sequence
MPLPRIRVSA NRRFLMTEHG EPFFWLGDTA WELFHRLSLP EAEHYLDVRR QQGFNLIQAV 
ALAELDGLHT PNANGHIPLA GDDPTRPNEF YFRHVDAIIR MAAEKGLYIG LLPTWGDKVH
ARLWGIGPVI FNTDNARIYG RFLGERYRND PNIVWILGGD RPAEGYEAIW TAMAQGITEG
LGFKPFFTYH PMGGMSSSTT LHTADWLDMN MLQSGHHLMD APNWEMIRAD YARTPVKPAL
DGEPNYEHHP VDPYTRLWKP EYGRFTDYDV RKQAYRSVFA GACGFTYGSH SVWQMYAPKH
EPVNHPAPTW DEAIFAPGAR QLIHLKNLML SRPYFTRIPA PDLLPDVAPL STHVEKDNRV
NPFRAAHPVA TRDSEGAYGL VYFPLAEQTL TVDLRPLRGH IRASWFDSRS GGTHPIGGYE
RNIVTFTSPI AGPDWVLILD AESMTQL