| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1189 |
|---|
| Symbol | |
|---|
| ID | 5208140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1459416 |
|---|
| End bp | 1459889 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640594806 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_001275546 |
|---|
| Protein GI | 148655341 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.109999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGTC GAGGCACGAT TGAACGGCGT ATTCCGCCGC CCGACCCACG CTACAACAGC
GTGCTGGTGC AGCAGTTTAT TAATAAGGTG ATGCAGCGCG GCAAGAAGAG CATCGCCGAG
AAGATCGTCT ATCAGGCGTT CGACCTTGCG GCGCAACGCT TGAAGAAGCC AGCGCTGGAA
ATCTTCGAAA CCGCCGTGCG CAACGCCGGT CCGGTGATCG AGGTGAAGCC GCGGCGTGTC
GGCGGCGCCA CCTATCAGGT GCCGGTCGAG GTCAAGAGTG ATCGCCGACA GTCGCTGGCC
ATGCGCTGGT TGCTGATGTC GGCGCGCGCG CGCTCTGGTA AGCCGATGTA CGAACGCCTG
GCTGCTGAGT TGATCGATGC CTATAACAAT ACGGGCGCGA CGATCAAACG GAAAGAGGAT
GTGCAGCGCA TGGCGGAAGC CAACCGCGCA TTCTCGCACT ATGGACGCTT CTGA
|
|---|
| Protein sequence | MPRRGTIERR IPPPDPRYNS VLVQQFINKV MQRGKKSIAE KIVYQAFDLA AQRLKKPALE
IFETAVRNAG PVIEVKPRRV GGATYQVPVE VKSDRRQSLA MRWLLMSARA RSGKPMYERL
AAELIDAYNN TGATIKRKED VQRMAEANRA FSHYGRF
|
|---|
| |