Gene RoseRS_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1130 
Symbol 
ID5208077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1407370 
End bp1408170 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content60% 
IMG OID640594743 
Productglycosyl transferase family protein 
Protein accessionYP_001275487 
Protein GI148655282 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCA CCGTTTCCCT CTGGCAGGTC ATAAAGAAAG GCGCCGGAAT GGATCTTTCG 
CTGGTCATTC CATGCTTCAA CGAGTCGGAC AGCATCGATC AGATGCGTGC GCAACTGAAC
GCCATACGCC CGGAACTGGC GCGGCGCGGC TCGTTCGAGT TAGTGCTGGT CGATGATGGC
AGCACCGATG ACACCTATGA GCGACTGAAG GCAGCCTTCG CCGATTGGGA GCACGTGCAG
ATTGCACGAC ACGAGCGCAA TCGCGGGCTT GGCGCTGCGT TGCGCACCGG TTTTGCCCAC
GCGCGCGGCG AGGTCATTGT AGTGACCGAC AGTGACGGCA CATATCCTTT CACCACCATT
CCCGCCATGC TCGACATGAT GACGCCCGAC GTCGATATTG TCACATCATC GGCGTATCAC
CCACAGGGCG GCGTGGAAGG CGTACCCGCC TACCGTCTGT TGTTCAGCCA GGGCGCATCG
CTGATCTACC GGTTGCTGGT GAACCGCCAC ATTCATACGT ACACCGCAAT GTACCGCGCC
TACCGTCGCC GCGTCATCGA GCAGGTTCCG CCGACCCTCG AAGGGTATGT CGTTATGGCG
GAAATTCTGG TGAATGCACT GCTGGCGGGG TACCACGTCG TCGAATACCC GGCGGTGTTG
CATGTGCGCA AATTCGGTCA GTCGAAAGCG AAAATCTGGC GCATTACAAA ATCGCATCTG
CGTTTTCAGG CGCACATCCT GCGGCGACGG CTGGCAGGGT TGCTCCGTGC TGCGCCGGTC
ACAACCGGCA GGGTGAAGTG A
 
Protein sequence
MALTVSLWQV IKKGAGMDLS LVIPCFNESD SIDQMRAQLN AIRPELARRG SFELVLVDDG 
STDDTYERLK AAFADWEHVQ IARHERNRGL GAALRTGFAH ARGEVIVVTD SDGTYPFTTI
PAMLDMMTPD VDIVTSSAYH PQGGVEGVPA YRLLFSQGAS LIYRLLVNRH IHTYTAMYRA
YRRRVIEQVP PTLEGYVVMA EILVNALLAG YHVVEYPAVL HVRKFGQSKA KIWRITKSHL
RFQAHILRRR LAGLLRAAPV TTGRVK