| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0991 |
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| Symbol | |
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| ID | 5207937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1213856 |
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| End bp | 1216600 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640594605 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001275350 |
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| Protein GI | 148655145 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.957169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCCT ATCACATGCC GCTTCCCGGT CCCTGGGAAT TTCGTTTCGA CGATCAATCC
GATTGGACGC CGATCACCGT TCCTGGCTGT TGGGAAGATG CCGGTTTCCC GAAGGATCGC
GCCGGTCCGG CGTGGTATCG CACGACATTC GTTCTTCCGC AAGAACTGGC AGGACGTCGT
CTCTTCCTGC GCTTTGGCGC CGTCAGTTAC CATTGTGAAG CATTCATTGC GCGCGATTCG
GGCGAGATGC GCAGTATTGG CACACACACC GGCATGTGGG ACACATTCGA CCTGGCGCTT
GGCGATGCAG CGGCAGCCGG TGAGTGCGTC ACACTGCTGG TGCGCGTTGA AAAACCGGCA
AGCCTGACGG GAGGACCGGA GTCGCCGTCG CAGCCGGGGC GCTTCCCACT GCGCGAGACC
CTCGCCGGTT TTCTGCCGTA TGTCTGGGGG CATAGCCACG GTGGAATCTG GCAGGAGGTT
GCGCTGGTCG CTGCTGGCGG AACCCGCTTC CTCGATGCAT GGGTGCGCGG TTCAGCCGAT
GGGTATGTCT TCGTGGAAGC AGAGCTCGAC GGTCCGGCGC GGGTAATGCT GGAGTTGTAC
CGACCCGACG GCGGGTTCAT TCTGTCTGCC GAAGAAGATG CCGTGCGTGA GGACACGCCG
ACTGGAGAAC GCTACATGCT GCGGATGAAC GGTCCTATTC CTGATCCGCG CCCCTGGTCG
CCCGCCGACC CCGCGCTCTA CCGCGCTGTG CTGCGCGCTG GTCACGACGA CCGGGTTGAA
CTGCGCTTCG GGTTGCGCTC GTTCGAGGCG GACGGAACAA TGCTGCGGCT CAACGACAAA
CCAATCTACC CGCGCATGAT CCTGTCGTGG GGATGGCGCT GGGAAACATT CGCCCCCAAT
CCCGGCGTGG AACGGGTGCG CGTCGATTTC GAGCGCCTGA AGCGCCTGGG GTACAACGGC
ATCAAGTGCT GCCTGTGGTT CCCGCCGCAG TACTACTTCG ATCTGGCGGA CGAAATGGGC
ATGCTGGTGT GGGTCGAGTT GCCGATGTGG CTGCCCCGCG TGACCGACCA CTTTCGCCAG
CAGGTGTACG TCGAATACGA ACGCCTGATC CGCCAGGCGC GCCGTCATCC GTCGGTCGTG
ATCTACAGCC TGGGGTGTGA ACTGGGAAAG GACGTCGGCG CCGACATCCT TGGCTCGCTG
TACGCAATGA CGCGCAGTAT GTGCGGCGAG GCGCTGGTGC GCGATAACAG CGGTTCAGGC
GAGGCGTATG GCGGCTTGCT CAACGAGTTT GCTCAGTACT ACGATTACCA TTTCTATGCC
GACCTGCACT TCTTTCGCGG TCTTCTCGAC GCTTTTACAC CGCGCTGGCG CGGGGCGCAC
CCCTGGCTGT TCGGCGAATA CTGCGACTAT GACACCTTTC GTGATCTGCG GCGCTACCGC
AACGTTGATG GTTCGCGTCC CTGGTGGTTG AGCGCCGATG AGACGATCAA CCCGACCGGT
GCACGCTGGA TGAACGAAGC GCCCTTCCTT GAGGAACGGC TGCGCGCCCA GGGATTGTGG
GAGCGCAGCG CCGAACTCGA AGCCATTTCC TACGCCCATG GACTGCTTCA CCGCAAGTGG
ACGGTCGAAC TGACACGCGC CTACCGCGAA ATTTCCGGCT ATGTCATCAC CGGTGAAGCG
GATACGCCGA TCTCCAGCGC CGGTATGTGG GACGCAACCG GAGCGCTCAA ATACGATCCC
ACCGAATTTC GACGCTTCAA CGGCGACCTG GTGGCGCTCA TCGGGTGGGA TCGGCGGCGC
GATTGGGTGC GCGGCGGCGA TCGCGTGGCG TGGTGGGATG TCTGGAGTTA CACCGCCGGC
GCGCTCGTCC GTCCACATCT GATCGCGTCG CACTACGGCG CGGAGAGCGG GCCGGCGCGC
GCGGTCTGGA GCATTGCCTT CGACGACAGA CCGCCGTTCG CGTCCGGTGA AGTAACGACC
GACCGCGACC TGATGCCGGG AGAGGTGCGC GAAATCGGCG TGGCGGAGTT CACTGCGCCC
GACGTGAGCG CGCCACTGCG TGCAACCTTG CAGGTAACGC TGAGCGTCGG CGCCCAACAG
ACAGAAAATG CGTGGTCACT CTGGTTCTTC CCCGCCGATT TCTGGGCATC CGTGCAGCAT
GTCGCACTCT ACGATCCGAT AGGACGGCTG CGCGACCTGG CGCGTCTTGC GCCGCAGGCA
GTGGAAGTCC TGCATGGCGA TCTGCGGGGT GACGCGGGAG CGCGCATCAA TCTGCGCGGA
TCGACATTTG TTGTTGTCGC CAGCGCCTGG ACGCGCGCAT TATCGGCGTA TACCCGATCC
GGAGGGCGTG TTGTGCTGAT CCAGGACGGC GACGGTCCTC CAGGACCGGT TGCAACGGCG
GCGATGCCGT TCTGGCGCGA AGCGTTGCGA CTCTGTGAGC CGCATCCGGC GTGGGGCGAC
TTCCCACACG ATGGATGGGC CGGATTGCAG TTCTTTGGGT GCGCAACCGA CCATGCGCTC
GATACGCAAC CGCTCGGCGG GTTGAGCCGC CCGATCCTGC GCCGGATCGA CACCCGGACG
GCGGCGGTTC ACGATTATGC TGCTGAACTG ACGTGGGGCG ATGGACGGGT GATCGTCAGC
ACCCTTCGTC TCTACGGCGG CGCAGGTGAA CAACCTTCCG GCATCGCCCG CAACACCGCA
GCCGCGTACC TGCTGCTGTG CTGGGTGCGG TATCTGCAAG GTTGA
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| Protein sequence | MLSYHMPLPG PWEFRFDDQS DWTPITVPGC WEDAGFPKDR AGPAWYRTTF VLPQELAGRR
LFLRFGAVSY HCEAFIARDS GEMRSIGTHT GMWDTFDLAL GDAAAAGECV TLLVRVEKPA
SLTGGPESPS QPGRFPLRET LAGFLPYVWG HSHGGIWQEV ALVAAGGTRF LDAWVRGSAD
GYVFVEAELD GPARVMLELY RPDGGFILSA EEDAVREDTP TGERYMLRMN GPIPDPRPWS
PADPALYRAV LRAGHDDRVE LRFGLRSFEA DGTMLRLNDK PIYPRMILSW GWRWETFAPN
PGVERVRVDF ERLKRLGYNG IKCCLWFPPQ YYFDLADEMG MLVWVELPMW LPRVTDHFRQ
QVYVEYERLI RQARRHPSVV IYSLGCELGK DVGADILGSL YAMTRSMCGE ALVRDNSGSG
EAYGGLLNEF AQYYDYHFYA DLHFFRGLLD AFTPRWRGAH PWLFGEYCDY DTFRDLRRYR
NVDGSRPWWL SADETINPTG ARWMNEAPFL EERLRAQGLW ERSAELEAIS YAHGLLHRKW
TVELTRAYRE ISGYVITGEA DTPISSAGMW DATGALKYDP TEFRRFNGDL VALIGWDRRR
DWVRGGDRVA WWDVWSYTAG ALVRPHLIAS HYGAESGPAR AVWSIAFDDR PPFASGEVTT
DRDLMPGEVR EIGVAEFTAP DVSAPLRATL QVTLSVGAQQ TENAWSLWFF PADFWASVQH
VALYDPIGRL RDLARLAPQA VEVLHGDLRG DAGARINLRG STFVVVASAW TRALSAYTRS
GGRVVLIQDG DGPPGPVATA AMPFWREALR LCEPHPAWGD FPHDGWAGLQ FFGCATDHAL
DTQPLGGLSR PILRRIDTRT AAVHDYAAEL TWGDGRVIVS TLRLYGGAGE QPSGIARNTA
AAYLLLCWVR YLQG
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