| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0905 |
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| Symbol | |
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| ID | 5207851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1117623 |
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| End bp | 1120691 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640594519 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001275264 |
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| Protein GI | 148655059 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.995306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000299578 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCCGC GCAAACTGGC ACTGCAAAAC TTTATGTGTT ACCGCGAAGG ACTGCCGCCG
CTCGAGTTCG ATGGCATGTC GATTGCGTGC CTGGCAGGCG AAAATGGCGC CGGCAAATCG
GCGCTGCTCG ACGCCATCAC ATGGGCGCTG TGGGGCGAGG CGCGCCTGAA GAGCGATGAT
GACCTGGTGG CGCTTGGCGC TACTGAGATG ATGGTGGAAC TGGAGTTCAC CCTCGATGGG
CAGGATTACC GGGTCATCCG GCGTCGCATT CGCGGGAAGC GCGGCGGTCA GAGCCAGCTC
GATTTCCAGG TGCGCGATGG GAACGAATGG CGCTCGCTCA CTCCCGGCGG CATTCGTGAA
ACGCAGCAGT TGATCATCCG CACGTTGCGG ATGGATTACG AGATGTTCGC CAACTCCGCC
TACCTCCGTC AGGGGCGCGC CGATGAGTTT ACCCGCAAAG AGCCGGCAAA GCGCAAGCAG
GTGCTGGCGG ACATTCTCGG TTTGAGCATC TACGAGGAAC TGGAAGGTCG GGCGAAAGAG
CGTGCGCGCA GCACTGAAGG ACAGATTCGC GGTCTCGAAG GACAGATCGG TGAACTGCGC
CGGCAGGCGG AACGCTATGA CCTGCTGGTG GAAGAGGTGC ACACTGCTGA AGAGCGTGTC
GCCGATGCGA TGAAGCGTGT CGAAGCGGCG CGACTGGCGC TCGAAGAGGC GACTGCCAGC
GTGCAGAAAC TCGAACAGGT CCGTACCATC CGTGACAATC TCCACACCCA GACTCAGCGA
CGCCGCAGGG AACGCGAGGA TCAGGCGCAA TGGCTGGATC GGCAGATGGA AACCCAAAAG
CGCGCCGAGT CCTGGATTGC GCGTCGCGCC GAGATCGAGG AGGGCATTCG CCTGCTACGC
GCCGCCAAAG CGGAGTGTGA TCGCCTCGCC GCCCTGCGCG ACGAGTATGA CCATCTGCAG
AGCCGTCGCG CGGCGCTTGC GCAGGCGCTC GCCAATGCAG AACACGCCAT CCGCTCCGAT
CTGCGCGTTG CCGAAACGCA GGTTCAGACC CTCCGCGAAC GCGCCGCCCG TCGCCCGAAA
CTGGCAGCGG AACTTCAGCG CCTCGCTGCC CAACTTGCAG AACATCCCCC GATTGCAGAA
GCGCTCTCCG CTGCCCGCAC CCGTCGCGCC ACGCTGACCG AACGTCTGCG GCGCGTCAAC
GAACTGTTGC GGCGCCGCAC CGAACTGGAG AGCGACATCA AACTGAAACA CGACTCGCTG
GTCGCCACGC GCGAAGAGCA GAAGCGCACA CTCCGCACGC TGGCGGAGCA ACTGAAGCAC
GAAGCGCGCT GGCGCACCGA ACTCGCCGAA GCGACTGCGG AACGGGCACG CCTCGAACAG
GAAGCCGCCC ACCTCGATAC TCTGCGCGAC GACGAGCGCG CCCTTGCCGA AAAGATCGGC
GCCATCCGCG CCGAATGCGA AACGGTCAAA AAGCAGGGCG ATCAGATCAA CGAGAAACTG
CGCCTGCTCG GTCCCGATCT CAAAGTTTGC CCGCTCTGCA AGAGCGAACT GGGACACGAT
GGCATTGCGC ACATCCAGGC GGAGTACGAA CGCGAACGTC AGGCGCTGCG CCAGCAGTAT
GCGGCTGCAA AACGCGAAGC CGATCACCTG GAAGCGCACC TCAAACGTCT GCGCAACGAC
ATTCGCACCA TCGAGGCGCG TGTCAACACC CTCCCCGACG TGCAGGGACG CATTGCGCGC
CTTGAAAGCG AACTGGCAAA ATGTGACGTC TGCCGCCAGC AGCAGATCGA GGCGCAACGC
CTGCACGACG ATGTGGCGCT GCGCCTGTTG AAGAACGATT ACGAACCGGC GGCGCGCGAG
GAACTGAAGC GCATCGACGC CGAGATCAAC GCACTGGGAT CGGTCGATGC GCTCGAACGC
GAGATTGCCG CAGTCGAACG CCAGGTTGCC GCGCTCGAAG ACCGCAGTCG AGAACAGGCA
AGCGTGCAGG CGAAGATTGA CGGGTTGCAG CGCGAGATTC AGCAGATCGA CAGCGAAGAC
CCTGCGCTGC ACGAACAGGA GCAGATCGTC GCGGCGTTGA GCGCCCAACT CGCACAGGGC
GATTTCGCGC ACACCGAGCG CGCCGCGCTT GCGGACATCG ACCGGCAGAT TGCAGCGCTG
GGATACAGCC GCGAGCGGTA TGACCAGGCG CAGGCTGATG TCCAGGCTCT GGTTCACTGG
GAAGAAGACC TCATACGCCT GCAACGCGCC GAAGAGTGGC TTGCCGAAAA CCGCGACGAA
CTCGCGCGCG CGGCTGAGCG CCTCCGGCAA CTCGACGCCC AGATCGCCGC CGACGAGGAA
GAGGTGCGTT CCCTCGACGA ACGCCTGTGC GACCTGGCGC CAGCCGCGCG CGCACGCGCC
GAGGCTGCCG CCCGGCTCGA CGAACTCAAC CATGAGGTGA TGGCGCGCCA GAAAGACCTG
GGCGAACGCC AGGCGGATCT GCGCCGCGCA CAGGAAGCGA CCAGCGCACT CGCCGAAGCC
GAAGCGCACC GCCAGGCGCT GCTCGAACGC AAGGGGTTGT TCGATGAACT GACGCAGGCG
TTCGGCAAGA AAGGCATCCA GGCGATGCTG ATCGAAACCG CGCTTCCTGA ACTGGAACGC
GAAGCCAACC GCCTGCTCAG CCGTATGACC GACAATCAAC TCCACCTGAC CTTTGAAACA
CAACGCGACA CGAAGAAAGG GGAGGTCGCC GAGACGCTCG ACATCAAAAT CGCGGATGCG
CTCGGCACCC GCGTGTACGA CGCCTACAGC GGCGGCGAGG CGTTTCGCCT CGACTTCGCC
ATCCGGATCG CGCTCTCGAA GTTGCTGGCA CGGCGCGCTG GCGCGCGCCT GGAAACCCTG
ATCATCGACG AGGGGTTCGG ATCGCAGGAC GCTCGCGGGC GTGAGCGCCT GGTCGAGGCG
ATCATCTCGG TGCAGCACGA TTTCCGCCGC GTTCTGGTGA TCACCCACAT CCAGGAATTG
AAGGATATGT TTCCGGTGCA GATCGAAATC GTCAAAACAC CAAACGGCAG CGTCTGGAAC
ATCGTGTGA
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| Protein sequence | MIPRKLALQN FMCYREGLPP LEFDGMSIAC LAGENGAGKS ALLDAITWAL WGEARLKSDD
DLVALGATEM MVELEFTLDG QDYRVIRRRI RGKRGGQSQL DFQVRDGNEW RSLTPGGIRE
TQQLIIRTLR MDYEMFANSA YLRQGRADEF TRKEPAKRKQ VLADILGLSI YEELEGRAKE
RARSTEGQIR GLEGQIGELR RQAERYDLLV EEVHTAEERV ADAMKRVEAA RLALEEATAS
VQKLEQVRTI RDNLHTQTQR RRREREDQAQ WLDRQMETQK RAESWIARRA EIEEGIRLLR
AAKAECDRLA ALRDEYDHLQ SRRAALAQAL ANAEHAIRSD LRVAETQVQT LRERAARRPK
LAAELQRLAA QLAEHPPIAE ALSAARTRRA TLTERLRRVN ELLRRRTELE SDIKLKHDSL
VATREEQKRT LRTLAEQLKH EARWRTELAE ATAERARLEQ EAAHLDTLRD DERALAEKIG
AIRAECETVK KQGDQINEKL RLLGPDLKVC PLCKSELGHD GIAHIQAEYE RERQALRQQY
AAAKREADHL EAHLKRLRND IRTIEARVNT LPDVQGRIAR LESELAKCDV CRQQQIEAQR
LHDDVALRLL KNDYEPAARE ELKRIDAEIN ALGSVDALER EIAAVERQVA ALEDRSREQA
SVQAKIDGLQ REIQQIDSED PALHEQEQIV AALSAQLAQG DFAHTERAAL ADIDRQIAAL
GYSRERYDQA QADVQALVHW EEDLIRLQRA EEWLAENRDE LARAAERLRQ LDAQIAADEE
EVRSLDERLC DLAPAARARA EAAARLDELN HEVMARQKDL GERQADLRRA QEATSALAEA
EAHRQALLER KGLFDELTQA FGKKGIQAML IETALPELER EANRLLSRMT DNQLHLTFET
QRDTKKGEVA ETLDIKIADA LGTRVYDAYS GGEAFRLDFA IRIALSKLLA RRAGARLETL
IIDEGFGSQD ARGRERLVEA IISVQHDFRR VLVITHIQEL KDMFPVQIEI VKTPNGSVWN
IV
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