Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0650 |
Symbol | |
ID | 5207588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 802727 |
End bp | 804304 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640594267 |
Product | CRISPR-associated Cse1 family protein |
Protein accession | YP_001275020 |
Protein GI | 148654815 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAT CCCTGAGTTT CAATCTGTGG ACTGAACCCT GGATTCGGGT CATCCGACGC GACGGGCGCG ACGATGAGAT CGGCATTGGC ACGTGCCTGA CCGACGCGCA CGAACTGGCA GCGCTGAGCG ACCCCTCGCC GCTGGTCGCA GGCGGGACGC ATCGCTTGCT GACGGCAATT CTGCAAGCGA TCCATCAACC ACAAGATATA GGAGAGATAG CAGCGTTGCT GCACAACGCG AAGTTCGACA TAAACCGCTT GCAAGCGTTT GAGAAGAACC ATGCTGGACG CTTCGATCTC TTCGATCCTC ACGCCCCGTT CCTGCAAACC GGCGATGTTC CGCTTCACAG CAATCACAAC CCGCAGCCGG TCGCGCGCCT GTTTGCCGAG ATACCGGTAG CAACAGAACG GGTCCACTTC ACTCATGTGA CCGACGACCG CCATCGCATC TGCCCAGCAT GCTGCGCACG CGGGTTGGTG ACAGCGCCAG CATTCGCCTC TTCTGGCGGC GCAGGCATAC GTCCCTCGAT TAATGGTGTA CCGCCGATCT ACGTCCTGCC GGCTGGCGAT ACGCTGTTCG AGACACTGAC CCTCTCTCTG GTCAGCAGCG ATTATCTGCC GCCAGGCGCC GATCCGAAGC GAGCCGATCA GGCGATCTGG AACAGCGATC CACCAGTCGT TGGCAAGAAT TGCGAAGTCA GCGCGGTCGG CTACCTGGAG AGTCTTACCT TTCCTGCCCG CCGGATGCGG CTCTATCCGC AAGCAGGATC GGTGTTCTGC ACGAACTGCG GGCGCCAGAC CGACATTTTC GTTGCCACAA TGCTTTTCGA GATGGGTCAC TGGCTCAGCA AGCAGACGGG TGTCTGGGAG GATCCTTTTG TTGCGTTCCG AAAACCGTCG AAGCAGAGCA AGAATGCCGA TCTCAAACCA ATCCGTCCCG AAGAAGGCAA AGCCATCTGG CGCGAGTATG CTGTGTTGTT GCTGGACGAA GATGCAGCCG GTCTGCGTCC ACGCATTGTG CGACAGCTGG CGCGCCTGAT CGATAGAGGG ACGCTCACCG GGCGCCAGCG TCTTCGCTTT CGCTGTATTG GCATTCGCAC CGACGGCAAA GCCAAAATCT TCGAGTGGCT CGATGAAGCG CTTGAAGCGC CGCCAGAATT GCTCCAAGAC CCCGACGCCG CCGCCTATGT CGGTGAAGCG CTCCGTCAGT CCCACGAGGT GGCAGCCATT CTCAAGAGCA CCTTTGAGCG TCACTTTCGA CCCGAACGCG GAACCGGCGG ATCGAACGAA CAGAAATTCA TCCGTTTCAA AACTGTGCTC GAACGTCTGA TTGCCGACTA CTGGCGGCGG CTGGGACTCC ATTTCCGCCA GTTTGTCAAT GATTTGAGCG ATGTCTGGCA GCGCGATGAC ACCGCACGGA CATGGGTGAT ATTGATCATC AAGGAAGCGC AGGCATGTTT CAGAACCGCT CTCGATCAGA CCGGTGACCG CGCCGATGCT TTGCGCATTC GGGTCGAAGC TCAGGCGGAA TGTGAGCGTC AGCTGCATGC CAGACGAAAG GAGTGGCTGA ATGAGTGA
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Protein sequence | MTASLSFNLW TEPWIRVIRR DGRDDEIGIG TCLTDAHELA ALSDPSPLVA GGTHRLLTAI LQAIHQPQDI GEIAALLHNA KFDINRLQAF EKNHAGRFDL FDPHAPFLQT GDVPLHSNHN PQPVARLFAE IPVATERVHF THVTDDRHRI CPACCARGLV TAPAFASSGG AGIRPSINGV PPIYVLPAGD TLFETLTLSL VSSDYLPPGA DPKRADQAIW NSDPPVVGKN CEVSAVGYLE SLTFPARRMR LYPQAGSVFC TNCGRQTDIF VATMLFEMGH WLSKQTGVWE DPFVAFRKPS KQSKNADLKP IRPEEGKAIW REYAVLLLDE DAAGLRPRIV RQLARLIDRG TLTGRQRLRF RCIGIRTDGK AKIFEWLDEA LEAPPELLQD PDAAAYVGEA LRQSHEVAAI LKSTFERHFR PERGTGGSNE QKFIRFKTVL ERLIADYWRR LGLHFRQFVN DLSDVWQRDD TARTWVILII KEAQACFRTA LDQTGDRADA LRIRVEAQAE CERQLHARRK EWLNE
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