| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0524 |
|---|
| Symbol | |
|---|
| ID | 5207461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 657556 |
|---|
| End bp | 658575 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640594144 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_001274898 |
|---|
| Protein GI | 148654693 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.287125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCGA CGATCAAACA GGTTGCGCAG CGGGCTGGCG TATCGGTTGC CACTGTGTCG
TATGTGCTCA ACGGCACCGG TGTGGTGACG GACGAAACAC GCCAGCGGGT GCTCGATGCC
GTCGCTGAAC TCAACTATCA ACCGCAGCAC GCAGCGCGTA GCATGCGTGG TCGAAGTCGC
ACGCTCGGCG TGACGCTGTC TGCGCTGCCA GGGCGTCTGG CGGAACCGGC GCTGACCGAG
GTGTTAGCCG GTGTGGCGGA CGCCGCCGCT CTGCGTGGCT ACTTTTTGCT GCTGGCAACG
GCTGGCGCGG ATCAGGATGA GACGGAATTG TGCCTGAGCC TGGCGCGCAC CAGACGGGTT
GATGGGCTGG TGTTGTTTGA CATGCTGGTG GATGATCCGC GTGCGCAGGC GCTCGCCGGG
GCAGGTATTC CGCATGTGTG CGCCGGTCCG CCTCCGGCAG GCATTGATAG CCCCTCAGTT
GCCATCGATA TGCACACCGC AGCCGTTGAT GCCGTGCGCC ATCTGCTCGG TCTGGGGCAT
CGGCGGATCG GCTTGATCCA GCCCCCTTCG GAACTGGCGG TGAGTGAGCC GATTGTCGAA
GGGTATCGGC AGGCGTTGAC CGAAGCAGGT CTGCCGTTCG ACCCGACGCT GGTTGTCGAA
TCGGGGCGCG CGGAGGAAGA TGGCTACCAG GCAATGACTG AGTTGCTCGC ATCTCCCAAA
CCGCCAACCG CTGTGCTGGC GGGAAGCGAC GAACTGGCGT TTGGCGCTAT GCATGCGCTC
AACGACGCTG GTCTGATCGT TGGGCGCGAT GTGTCGCTGG TCGGGTTTGA TGATCTTCCA
CAGGCGGCGC ATGTGAATCC GCCGCTGACG ACGCTGCGCC AGCCGCGGCG TGTGCAGGGT
CAACAACTGG CAATGCTGCT CGATGATGTG ATTTTGAAAC GCAATACCAG TTTGCGCACG
GTAACGTTGA GCGCGCGCCT GATCGTTCGC AGGTCGAGCG GCCCGGCGCC TGTATCGTAG
|
|---|
| Protein sequence | MQATIKQVAQ RAGVSVATVS YVLNGTGVVT DETRQRVLDA VAELNYQPQH AARSMRGRSR
TLGVTLSALP GRLAEPALTE VLAGVADAAA LRGYFLLLAT AGADQDETEL CLSLARTRRV
DGLVLFDMLV DDPRAQALAG AGIPHVCAGP PPAGIDSPSV AIDMHTAAVD AVRHLLGLGH
RRIGLIQPPS ELAVSEPIVE GYRQALTEAG LPFDPTLVVE SGRAEEDGYQ AMTELLASPK
PPTAVLAGSD ELAFGAMHAL NDAGLIVGRD VSLVGFDDLP QAAHVNPPLT TLRQPRRVQG
QQLAMLLDDV ILKRNTSLRT VTLSARLIVR RSSGPAPVS
|
|---|
| |