| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0410 |
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| Symbol | |
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| ID | 5207346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 521356 |
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| End bp | 523833 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640594036 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001274791 |
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| Protein GI | 148654586 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGCG ATCAATCGCT GTATTGGCTC ATATGCGGAT ACGGGATTGT CAATGGTATA
ATGCCGGGCA TGGCGAATGT TCCGGTTGAA CCGCGTGTTG CTGCGCAAAC GCAGCGTGAT
CGACCACGCC TGCTGCGGTA TGCGCCTGGA GTGCTGGCGC TGGCGCTGTT TCTGGCGCTG
GCGCTGGGGC GCGGCGTTCT CGGCGCTGCC GCCGTGCCGG TGCAGGGTGC GCTGGCACTG
GCGTTGCTGG GGTCGATCCT TGCGCATCCG CAGGTGGTGG CGCGGGTGCG CGTCACGCGC
ACCGCAGTGG CTCTGGTCGG CATCCTTGCG CTGGCGCTGG GGTTGCGGGT CTGGGGATTG
CGCTTCGGAT TGCCCTACTT CGAGCACCCT GATGAATGGG CGGTCGCCGA CGAGGCGCTG
CGGATGCTGC GCACGGGTGA GTATACTCCT TTTTCGTACA CCTACCCGAC ACTCTATGTC
TATATGCAGG TCGGCGTGGC GACGTTCCAC TTTCTCTGGG GTGCTGGCGC CGGTCTCTAC
CGCACCCCTG CCGACATCGA TCCGGTGCGG TTCTATGTCT GGGCGCGCGC GTTGACCGCC
CTGCTTGGCA CGGGCGCTGT TGCGCTGACA TTCCTGGCGG GACGTTCCCT CTACGGGCGC
ACGGCTGGAC TGCTGGCGGC TGCACTGATC GCGGTCATGC CAGCGGTGGC TGGCGATGCG
CATTATGTGA CGACCGATAC GCCAGCGATG TTCTTCACCC TGCTGGCATT CCTGGCTATC
GCACGGCTTG GTGTTGCGCC GGAGCACGAC GGGGGGCGGG AAACGCTCCG GTCGACGCTG
GCGCTGGCGC TCTTCGCCGG GTTTGGCGTC GGCATCGCTA CAGCGACCAA ATGGAACGCT
GGCGCACTCG TGATCGCGCT GCTGGCATCG ATTGTGTTAG TTGCGCATCG TCGCATGTCC
GACACTCAAC GCTCAACCCC CAACGTTCAA CCATCCTCCC AACGTTCAAC GTTCAACGTT
CAACCTTCAC CGCTCAACCT TCAACCTTCA ACCCCCAACG TTCAACCATC CTCCCAACGT
TCAACGTTCA ACCTTCACCG CTCAACCTTC AACCTTCAAC CTTCACCGCT CAACCTTCAA
CCTTCAACCT TCACCGCTCA ACCTTCAACC TTCAACCTTC AACCTTCAAC CCTCAACCTT
CTCCTCGCCG CTCTCGCTGG CATCCTGCTG GGTTTTACAC TCGGCGTCCC GTTCTGGTTG
CGCGATCTGC CACGCATTCT CACCGATCTC GCCGGGATTA TCAGACATTA CCGTTTCGAC
GGGCATCCGG GCGCCGAGTC AGACCAACCG GCGCTGTTCT ACTGGTGGGC GTTGACCCGT
GAAGGGACGC TGCTGGCGTG GGCATGTCTG GGAGGGGTAG CGCTGGCTTT CCTGCGACGC
AAATCAGCCG ATATCCTCGT TCTGGCGGTT ATCGTTCCTG CGGTGTTGCA ACTGACCGGG
GTGAAGGTCG TGTTCTTCCG CAATGCGATG CCGCTGCTGC CATTCCTGTG CATCCTTGCC
GCAGCGCTGG TTGTTGCTAT CGTTGATTGG TGGACAACCG CGAAGCGAGA TACGGCAGTG
CAATCCGAAC GCAGGGAAGC GCCAGCGCCG GTTGCATTCG TTCGTCGGCT GACCGGCAAC
CGCACTGCGC TGTTGCTGGC AGTCGCCGCG CTGCTGATGG CTGAACCGCT GGTGCAGGCG
ATCCACGACG AAACGCTGCG CTCCCGTCCG ACGACGCGCA TTCTGGCGGG GGAATGGCTG
GAGGCGCGCA CAACGGATGG CGAGCGGGTC TGGCTGGAGG ACAATACCCT CATCCTTTCA
CCGCGTTTGC GCGCTATTGG CGGCGAGCCT GCCATCCGGC ACGAACTCGC CTGGTACCGC
GAGCAGGGCA TTCGGTTTGT GGTGGTGCAT CTTGACCGTG ATACGGGCGT GGCGGCGCTG
AATGCCTTTG GCGAACCGGC GGCGCGCTTT CTGCGGTCGG GTGAGCGGCA CGGACCTGAA
CTGGCGATCT TTGATACCGG TGCGCCTGAG GCGTCAATCG AGCCACGCAC ACCGTCAGGA
GCAACGCTCG GCGCCGGTGC GGTTGTGCTT GATGGGTATC GCCATCCGGG AAAGGTACAG
GCAGGCGGCG TGTTGCCGCT GGCGCTCTTC TGGCGCGCAA CGCGCCCGCT CCCGCTGGAT
TATACCGTGT ATGTGCACCT CGTCGATGCA GCGGGGAACA AAGTTGCGCA GCGCGATGTG
CCGCCGCTCG AGGGGCGTCG CCCGACCAGC GCCTGGCAGC CGGGAGACCT GGTGCGCGAT
GATCAGGACC TGTTCGTTCC TGAAACGGTG GCGCCGGGAA CCTATCGCCT GCTGGCGGGC
ATGTACGATG CCGCGACAAT GACGCCGATC AATGATGCGG GACCGATCGA TCTGGGGGTG
GTTACCGTTA CACGTTGA
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| Protein sequence | MGGDQSLYWL ICGYGIVNGI MPGMANVPVE PRVAAQTQRD RPRLLRYAPG VLALALFLAL
ALGRGVLGAA AVPVQGALAL ALLGSILAHP QVVARVRVTR TAVALVGILA LALGLRVWGL
RFGLPYFEHP DEWAVADEAL RMLRTGEYTP FSYTYPTLYV YMQVGVATFH FLWGAGAGLY
RTPADIDPVR FYVWARALTA LLGTGAVALT FLAGRSLYGR TAGLLAAALI AVMPAVAGDA
HYVTTDTPAM FFTLLAFLAI ARLGVAPEHD GGRETLRSTL ALALFAGFGV GIATATKWNA
GALVIALLAS IVLVAHRRMS DTQRSTPNVQ PSSQRSTFNV QPSPLNLQPS TPNVQPSSQR
STFNLHRSTF NLQPSPLNLQ PSTFTAQPST FNLQPSTLNL LLAALAGILL GFTLGVPFWL
RDLPRILTDL AGIIRHYRFD GHPGAESDQP ALFYWWALTR EGTLLAWACL GGVALAFLRR
KSADILVLAV IVPAVLQLTG VKVVFFRNAM PLLPFLCILA AALVVAIVDW WTTAKRDTAV
QSERREAPAP VAFVRRLTGN RTALLLAVAA LLMAEPLVQA IHDETLRSRP TTRILAGEWL
EARTTDGERV WLEDNTLILS PRLRAIGGEP AIRHELAWYR EQGIRFVVVH LDRDTGVAAL
NAFGEPAARF LRSGERHGPE LAIFDTGAPE ASIEPRTPSG ATLGAGAVVL DGYRHPGKVQ
AGGVLPLALF WRATRPLPLD YTVYVHLVDA AGNKVAQRDV PPLEGRRPTS AWQPGDLVRD
DQDLFVPETV APGTYRLLAG MYDAATMTPI NDAGPIDLGV VTVTR
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