| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0398 |
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| Symbol | |
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| ID | 5207334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 504160 |
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| End bp | 505386 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640594024 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001274779 |
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| Protein GI | 148654574 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACCTGT TCCTTCGCAG TATCCCGCAG TGGTTCGAGC GCAGGTTGAT CGGCGCCTTT
CCGGAGAATG TCCGCGCCAA TATTCGCATC GAACTGCTGG CTTCGTTCTG GTATGGCCTC
TTCTTTGCCG CCAGTCTGAC ATTCTTTCCG GTTATTCTGC GTCGTTTGGG CGCCACTCCC
TTCGAACTGG CGCTGTACGT CGTCTTCAGT TATATCGCTC AGACCCTGTC GCCGCTCAGT
CTCATGCTGC TGCGTCGTGT GGCGCCGATC CGCTTCTCGG TGATCGCCTG GTCATTCGGG
CGCGGCGTGC TCGTTTTTGG GGCGCTGTCG AGCAACACGT CCTGGTTGCT GGCGCTTGCC
GCACTGTTCT GGATCGCCGA GGCACTGCCA TCACCAGCAT ATGCGCGCAT CATGCAGCAG
ATCTACCCGC CGCGCCACCG TGGACGCGCG ATGTCAACCG TGCGGATCGG CGTCGCAATC
GTGGTGCTGA TCGCAACGCC GATTGCGGGT TGGGCGCTTG ATCAGGCGGG ACATCCGCCC
CTCTTTGCGC TGGCAGCAAT CTTTGGCGTT GTTTCGAGCC TGATCTTCTC GCGCGTTCGT
CCGATCGACG GCGCTGCGGA ACCGGAGAGT CCGCCAGCGC TTCGTGCATT GCTGCCGATC
GTGCGCCACG ACCGCCGTTT TGCGCTCTAC CTGCTGGTTC TGACGATCTA TGGGTTTGGC
GCTGTGATGG CGCTCCCGCT CTACCCGGTG GTGCAGGTGA CGAAACTCCA ACTCTCGTAC
ACAACCATCG GCTATCTGAA TCTGGTGCAA TCGCTCTGCT GGCTGGCAGG ATTCTTCGTG
TGGGGGCGTC TGCTCGACCG GTACGGACCG TTGTGGGTGT TGCGCCTCAG TATTCTCATG
GCAGCCTTTG TGCCGCTAAC CTACATCTGG GCTGGTCATG CCTGGATGTT GCTGCCCGCA
TTCATCTGCC AGGGTCTGAT GCAGGGCGGT TTCGAATTGG GGATCACCAC CGGCGCTATC
GACCTGGCAA AACGGGGGCA TGTGATGGAG TATACTGCGC TTCAAACGGC CACGATCGGA
GTGCGTGGCA TGCTGGCGCC GCTCATGGGG GCGGCGCTCC TCGGCGTGGG AGCATCCGAA
ACGCTGGTGT TGGGTCTTGC GGTTGGGTTG GTGGCAGGTT CGTGGGTTCT GCTCGGCGCG
GTGCGATTGC CACAGCATCC GTCATAG
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| Protein sequence | MHLFLRSIPQ WFERRLIGAF PENVRANIRI ELLASFWYGL FFAASLTFFP VILRRLGATP
FELALYVVFS YIAQTLSPLS LMLLRRVAPI RFSVIAWSFG RGVLVFGALS SNTSWLLALA
ALFWIAEALP SPAYARIMQQ IYPPRHRGRA MSTVRIGVAI VVLIATPIAG WALDQAGHPP
LFALAAIFGV VSSLIFSRVR PIDGAAEPES PPALRALLPI VRHDRRFALY LLVLTIYGFG
AVMALPLYPV VQVTKLQLSY TTIGYLNLVQ SLCWLAGFFV WGRLLDRYGP LWVLRLSILM
AAFVPLTYIW AGHAWMLLPA FICQGLMQGG FELGITTGAI DLAKRGHVME YTALQTATIG
VRGMLAPLMG AALLGVGASE TLVLGLAVGL VAGSWVLLGA VRLPQHPS
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