Gene RoseRS_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0245 
Symbol 
ID5207180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp313548 
End bp314210 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID640593875 
Productphosphoglycerate mutase 
Protein accessionYP_001274631 
Protein GI148654426 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.044549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACCA ATCTCTATCT GATCCGTCAT GGCGAAGCGT ACTCGAACGT GGAGCCAATC 
ATGGGCGGGA TGCAGGGCGA CCGCGGATTG ACGGAGCGGG GCATCGCGCA GGTTGAGGCA
CTGGCGCGCC GGCTGGCGAA GGGGGAGATC GCCGCTGATG TCCTGTATGC CAGCACCCTG
CCACGCGCTC GAATGACCGC CGAACCGGTG GCGGAGGCGC TCAATCTTCC GATCCACTGG
GACGACGATC TGCAGGAACT GCGTCCTGGT GAGGCGGACG GGCTGCATAT CGATGAAGCG
CGCGCGCGCT TCCCGCAGAT GAGCCTCTTC TTCAAAGAGT ATTTTACGCC CATCGCTCCT
GGCGGTGAAA GTTGGGCCAG TTTTCAGTTT CGCGCGTCGG CAGCGCTCGA ACGTCTGGTG
ACGCGCCATC ACGGTGAAAC CATCGTCGCC GTCTGTCACG GCGGCATTGT CGAAGTGTCG
TTTCTCTTCA TGCTTGGGCT TGGTCCTCAG GTGCGCGGAC GCAATGCCTT CCACATACGC
AATACCGCAA TCACGCACTG GCGCCAGGTC ACAAGCCGCG ATGGACGGCT GGAATGGCAG
TTAATCGCGC ATAACGACTG CTGGCATCTA CGCAACCTGG AGCCTGAACA GAGCCATGCC
TGA
 
Protein sequence
MITNLYLIRH GEAYSNVEPI MGGMQGDRGL TERGIAQVEA LARRLAKGEI AADVLYASTL 
PRARMTAEPV AEALNLPIHW DDDLQELRPG EADGLHIDEA RARFPQMSLF FKEYFTPIAP
GGESWASFQF RASAALERLV TRHHGETIVA VCHGGIVEVS FLFMLGLGPQ VRGRNAFHIR
NTAITHWRQV TSRDGRLEWQ LIAHNDCWHL RNLEPEQSHA