Gene Rmet_6227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6227 
Symbol 
ID4036665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp77614 
End bp78588 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content63% 
IMG OID637975253 
Producthypothetical protein 
Protein accessionYP_582036 
Protein GI94152634 
COG category 
COG ID 
TIGRFAM ID[TIGR03299] phage/plasmid-related protein TIGR03299 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0256712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.704554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCATC TGGTTCAAAC CATGGCGTAC GCCGGCGCAA CCCCCTGGCA CGGTCTGGGC 
AACCGCCTGG CGGAGCATCA GCCCCTCGAA GTCTGGGCCG AAGCCGCCGG CATGAACTGG
CGCATTGAGG AGACCAACGT TATGTACCGC GTTGGTTCCC ATGACCTGGA TCCCATCCAG
TCGTTTCCCG AGCAGAAGGT CCTGTACCGC TCGGACAACG GCAAGCCGCT GTCGACGGTA
TCTCAGCGGT ACCAGGTTGT TCAGCCTGCA GAGATCCTGG AGTTCTATCG AGACCTCGTG
CAGGTGGGCG GCTATCAGCT CGAGACTGCA GGCGTGTTGA AAGAGGGTCG CAAGCTCTGG
GCGCTCGCCC GTACGGGACA GTCAGCGCTC CTCAAGGGTG GTGACGAGGT CCGTGGCTAC
CTGCTGCTGG CCACGGCCTG CGATGGCACG CTGGCGACCA CGGCGCAGTT CACCTCGGTC
CGCGTGGTTT GCAACAACAC GCTGCAGATC GCGTTGGGTC GCAATCGTGG CGCCGTCAAG
GTGCCGCATC GTAGCCAGTT CGATCCGCGT GCGGTGAAAG AAGAGCTCGG CATTGCCATT
TCGTCGTGGG ATGGTTTCAT GGCCAACATG CACAGCCTCG CAGACCGTAA GGTCAGCAAG
GCCGAGTCCG AGCGGTTCTT CCAGCGCCTC TTTACCTATT CCTCGGCGAG GGATGGTGCC
GATGCGCCTG CAAGAATGAA CGAGCGTGGC CTGAAAGCCG TGCTGAGTCT TTTCGACGGG
GCCGGCCGCG GCGCTGCGCT GGAGTCTGCA TCGGGCACTG CTTGGGGCTT GGTGAACAGC
GTCACCGAGT ACGTCGACCA CCAGCAGCGA GCCCGCTCGC CGGGTAATCG GCTGGACTCT
GCATGGTTCG GCGCGGGCGC ATTTCTCAAG CAGCGCGCCT GGGACGCAGC CCTCGAACTC
GCGGAGATTG CATAA
 
Protein sequence
MSHLVQTMAY AGATPWHGLG NRLAEHQPLE VWAEAAGMNW RIEETNVMYR VGSHDLDPIQ 
SFPEQKVLYR SDNGKPLSTV SQRYQVVQPA EILEFYRDLV QVGGYQLETA GVLKEGRKLW
ALARTGQSAL LKGGDEVRGY LLLATACDGT LATTAQFTSV RVVCNNTLQI ALGRNRGAVK
VPHRSQFDPR AVKEELGIAI SSWDGFMANM HSLADRKVSK AESERFFQRL FTYSSARDGA
DAPARMNERG LKAVLSLFDG AGRGAALESA SGTAWGLVNS VTEYVDHQQR ARSPGNRLDS
AWFGAGAFLK QRAWDAALEL AEIA