Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_6167 |
Symbol | traU |
ID | 4036429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007971 |
Strand | + |
Start bp | 132896 |
End bp | 133930 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | sex pilus assembly and synthesis protein TraU |
Protein accession | YP_581976 |
Protein GI | 94152569 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0101379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC TCATCTCAGC GGCCCTCCTG CTCGCCGGTG CACTCTTCGG TTCTGGCACT GCGAACGCCG ACGCGCTTTG CACGGGCAAG TTTCCCAACC TGATCTCCGA CGTGTGCTGG TCATGCATGA TGCCGATCAA GTTGTTCGGC ACCGCGACTC TTCTCGGGGG CGGCCAGGAC GACTTCGATT CTGGCCCCGT GAACCCGATC TGCTTTTGCC AGAACCCGCC GAAAGTCGGC ATCCCGACGT CATTCTGGGA GTTCGACATG ATGACGGATG TGACTGCCGT TCCAGGCTGC TTCCCGCTGC TCGGTGGGGT GAGGGTGAAC ACTGGCGTGA ATGCCGATGC CTTCGGCCAG ATCTCTGATG ACCAGTCGGG GGAGATCGGG TCTACCCGGA CGTCGTTCAT GCAGGTGAAC CTCTACATCA ATCCGGCACT GTACGTCATG GGCGCGATTC TGGACGATTC CTGTCTGGAC CAGCGGGGCA TTGACATCCC TTGGGTGTCC TTCGCCGACC CGACGCACAA CGATGATGAG CTCGCCGGCA TCATCGCGCC TTACGCGTTC CCGTTCGGAG GGATGGTTGC CATCGGCGCA ATGTCAGCCG ATGCAGTGGC GGCTACTGCA GGCTTTCCGA TCCCAGAGAT CTTCTGGGCC GCGGGCGCCT ACGGGCACAT GTATCCCCTG ACAGGGAATA ATGAGGCTCA CCTGAGCATG GAGCAGACTG CGCGGCTCCA GACGACGCGC GTTCTGGCCA AACTCCATGC CGCCGGAACG CAGTGGTCAG CGTTCGGCAG CGATGCCATG TGCGGCTACT ACCCGCAGAT CATCATGGAT AAGCGGCAGT ACAAGTTCAC GCGCCTGTAC CCAATTCCGC AGACCGTCAA GATCGCCGGC AAATGCTGCG ACCCGATCGG GCGATCGCCC ATTCTTACCC AAACAAACAC TGAATTGCCC ATGCCGGGCT GGAGGGACTT TGGCTATGCG ATATTCCGCA AACGTGATTG CTGCAGCGGC GCTTCTCCTG GCTAA
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Protein sequence | MKKLISAALL LAGALFGSGT ANADALCTGK FPNLISDVCW SCMMPIKLFG TATLLGGGQD DFDSGPVNPI CFCQNPPKVG IPTSFWEFDM MTDVTAVPGC FPLLGGVRVN TGVNADAFGQ ISDDQSGEIG STRTSFMQVN LYINPALYVM GAILDDSCLD QRGIDIPWVS FADPTHNDDE LAGIIAPYAF PFGGMVAIGA MSADAVAATA GFPIPEIFWA AGAYGHMYPL TGNNEAHLSM EQTARLQTTR VLAKLHAAGT QWSAFGSDAM CGYYPQIIMD KRQYKFTRLY PIPQTVKIAG KCCDPIGRSP ILTQTNTELP MPGWRDFGYA IFRKRDCCSG ASPG
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